Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6 163 3e-35 seq1 132 5e-26 >seq6 Length=2060378 Score = 163 bits (180), Expect = 3e-35 Identities = 318/464 (69%), Gaps = 22/464 (5%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGG--CAGAGAGGCCGCCTTCGGCGAGCG 117039 ||||||| || ||||| | ||||||||| | || ||| ||| | ||||||| |||| Sbjct 1145902 AGAAGGCTGACTGGGCTATCCGCTGGATC-CAGGATCAG-GAGTCGACCTTCGGTCAGCG 1145845 Query 117040 CCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATT 117099 || ||||||||||| || || ||||| ||||||| || || || ||| | || || Sbjct 1145844 TCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTTGCCTCTATCTT 1145785 Query 117100 TTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAG 117159 ||||| ||||| || ||| | |||||||| || || ||| ||||||||| ||||| | Sbjct 1145784 CTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCG 1145725 Query 117160 GGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACC 117219 || |||||||| || |||||||| || |||| ||| ||| | || | Sbjct 1145724 TGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACCT--------GAAC 1145673 Query 117220 GAGCGCGGCGCGCGTCAG-----GGAGATCGTCACC---GACGCGGTCGCCATCGAGCAG 117271 | ||| || | |||| |||| ||| | | || || ||| |||| ||| || Sbjct 1145672 AACCGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAG 1145613 Query 117272 CGCTTCCTCACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTC 117330 ||||| || || || || || |||| ||| || || | || | | | ||||| Sbjct 1145612 GAGTTCCTGACTGACGCTCTTCC-TTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTG 1145554 Query 117331 GCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTA 117390 || ||||| ||||||||||||||| | || ||| ||| || | | | |||| ||| Sbjct 1145553 CCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTT 1145494 Query 117391 CAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||| | ||||||| | ||||| ||| || ||||||| ||| Sbjct 1145493 CAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGG 1145450 Score = 154 bits (170), Expect = 2e-32 Identities = 188/253 (74%), Gaps = 5/253 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || || Sbjct 1146303 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 1146244 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || ||||| ||||||| | ||| |||| || |||||||| |||||| Sbjct 1146243 TCTAAGGATCTTCACGACTGGCACAACCGCCTGAATGATGACGAGCGCTTCTTCATCTCT 1146184 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | ||| || ||||| || || ||| ||||||||| |||||||| || ||| |||||||| Sbjct 1146183 CGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAGCGT 1146124 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || || |||||||| | | ||||| || ||||||||||| || ||||| || Sbjct 1146123 TTCAGCGGAG-AGGTGCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATTATGAT 1146065 Query 116872 GGAGAACGTGCAC 116884 |||||| | ||| Sbjct 1146064 CGAGAACATCCAC 1146052 >seq1 Length=3471301 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || |||||||| || ||||| ||| ||||||| || | | ||||| | | Sbjct 909530 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 909471 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| |||||| || || | ||||| ||||| |||||| | |||||||| || || Sbjct 909470 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 909412 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | |||||||| | |||||||||||||||||| Sbjct 909411 GATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 909352 Query 40878 GG 40879 || Sbjct 909351 GG 909350 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| ||||| || ||||| | || || ||| | | Sbjct 258443 ATGCAGATCTTCGTTAAGACGCTCACTGGCAAGACTATCACTTTGGAAGTTGAAAGCTCG 258502 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| ||| || | ||||| ||||| || ||| | ||||| Sbjct 258503 GACACTATCGACAACG-TCAAGTCAAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCA 258561 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| || ||||| ||||| || || | ||||| ||| |||||||| Sbjct 258562 GCAACGTCTTATCTTTGCTGGCAAGCAGCTAGAGGATGGACGCACGCTCTCAGACTACAA 258621 Query 40869 CATCCAGAAGGAG 40881 || ||||||||| Sbjct 258622 TATTCAGAAGGAG 258634 Score = 104 bits (114), Expect = 2e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 1639375 GACAAGGAGGGAATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 1639316 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| || || || ||||||||||||||||||||| |||| || || || ||| | Sbjct 1639315 GACGGCCGTACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTC 1639256 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 1639255 CGCCTGCGTGGTGGTGG 1639239 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| |||||||| | || ||||| | | ||||| | | |||| ||||| Sbjct 257709 ACCGGCAAGACCATCACTTTGGAGGTCGAGTCGAGCGACACTATCGACAACG-TCAAGAG 257767 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || |||| || || || ||||| || | |||||||| || || |||| ||| ||||| Sbjct 257768 CAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATCTTCGCTGGCAA 257827 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || || | || |||||| ||||| ||||||||||||||| |||| || || Sbjct 257828 GCAGCTTGAGGATGGCCGTACCCTCTCTGACTATAACATCCAGAAGGAGTCCACCCTCCA 257887 Query 40893 TCTAGT 40898 || || Sbjct 257888 CCTTGT 257893 Score = 95.1 bits (104), Expect = 1e-14 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756 || |||| || || ||||| || || || |||||| | || || || | | ||| | | Sbjct 257994 TAGTCGTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGCGATACCA 258053 Query 40757 TGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGA 40815 | | |||| | ||| ||||| | |||||||| ||||| ||| | |||||||| || Sbjct 258054 TCGACAACGTT-AAGAGCAAAATCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGT 258112 Query 40816 CTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAG 40875 | |||| ||| || || ||||| || |||| || || || ||||||||||| ||| Sbjct 258113 TTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAG 258172 Query 40876 AAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| | || || || | || |||||||| | || || Sbjct 258173 AAGGAATCTACTCTCCACTTGGTTCTGCGCTTGCGTGGTGG 258213 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || || || || | || || ||| | || Sbjct 258215 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCC 258274 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| ||| |||| || |||||||| || || | |||||| Sbjct 258275 GACACGATCGATAATGTGAAGTCAAAGATTCAAGATAAAGAGGGAATTCCTCCTGACCAG 258334 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| ||||| ||||| || || | ||||| | ||| |||||| Sbjct 258335 CAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTTTGTCCGATTACAAC 258394 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||| | || |||| Sbjct 258395 ATCCAGAAAGAGTCTACATTGCA 258417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218601057680