Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 123 2e-23 seq1 93.3 4e-14 >seq6 Length=2060378 Score = 123 bits (136), Expect = 2e-23 Identities = 224/324 (69%), Gaps = 4/324 (1%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || |||||||| || || ||||| ||||| || || |||||| | || || ||| || Sbjct 1145837 GCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTTGCCTCTATCTTCTGGCTG 1145778 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||| |||||||||| || || || ||||||| | || || || || ||| Sbjct 1145777 AAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCGTGATGAG 1145718 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAA-TAAACCGACGC- 58158 |||||||| ||||| ||||| ||||| | | ||| ||| | ||| ||||| | Sbjct 1145717 GGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACCTGAACAACCGCCCCGACCCT 1145658 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 ||| | | |||| ||||| || || ||| | || || || ||||| | || | Sbjct 1145657 CAGATTG--TGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAGGAGTTCCTGACTG 1145600 Query 58219 AAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 | || || || || | || || |||||| | ||||||| |||||||||||| Sbjct 1145599 ACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGCCAGTACATTGAGT 1145540 Query 58279 TTGTTGCCGACAGACTTTTGCTCG 58302 | || |||||| | || || ||| Sbjct 1145539 TCGTCGCCGACCGTCTCCTGGTCG 1145516 >seq1 Length=3471301 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || || || || |||||| | || ||||| | ||| | ||| Sbjct 257997 TCGTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGCGATACCATCG 258056 Query 31263 A-AACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 | |||| | || || | ||| |||||| |||||| | || ||||||||||||||| | Sbjct 258057 ACAACGTT--AAGAGCAAAATCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGTTT 258114 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || |||||||| || ||| | || ||| | ||| || || || |||||||| || Sbjct 258115 GATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAGAA 258174 Query 31381 AGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| || |||| || Sbjct 258175 GGAATCTACTCTCCACTTGGTTCT 258198 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || || || || | || |||||| | ||| Sbjct 258215 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCC 258274 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| | | | || || || | || || ||||| Sbjct 258275 GACACGATCGATAATGTGAAGTCAAAGATTCAAG-ATAAAGAGGGAATTCCTCCTGACCA 258333 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | ||||| ||| || |||||| || Sbjct 258334 GCAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTTTGTCCGATTACAA 258393 Query 31372 CATTCAAAAAGAATCGAC 31389 ||| || ||||| || || Sbjct 258394 CATCCAGAAAGAGTCTAC 258411 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| || || || || || || ||| |||||||||| || ||||| | Sbjct 909531 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 909472 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || ||||||||||||||||| Sbjct 909471 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 909412 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || ||||| || || ||| | || || || ||||||| || ||||| || || Sbjct 909411 GATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 909352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765881796560