Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6 132 7e-26 seq3 89.7 8e-13 >seq6 Length=2060378 Score = 132 bits (146), Expect = 7e-26 Identities = 334/502 (67%), Gaps = 23/502 (5%) Strand=Plus/Minus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || ||||| |||||| | |||| || || |||||| | || | |||| | | || Sbjct 1145909 ATTCGTAAGAAGGCTGACTGGGCTATCCGCTGGATCCAGGATCAGGAGTCGACCTTCGGT 1145850 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | || ||||| |||||||| || ||||| |||||||| || || ||||| | Sbjct 1145849 CAGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTTGCCTCT 1145790 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| ||||| |||||||| || | |||||||| || || | |||||| |||| Sbjct 1145789 ATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATC 1145730 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTG 125597 ||||| || ||||| || ||| ||||||||| || || || ||||| || | Sbjct 1145729 TCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACCTGAACAAC 1145670 Query 125598 CGTCCCGAGTG-CAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAG 125656 || ||||| ||||| | || | || ||| || || || || Sbjct 1145669 CGCCCCGACCCTCAGATTGTG----GAGGACGTTATCG----TGGAA-----GCTGTCTC 1145623 Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAA 125716 || || | ||||| || || || | || || | | |||||||||||| ||| Sbjct 1145622 CATTGAGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAA 1145563 Query 125717 GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCG 125776 | |||||| ||||||| ||||| || || || ||||| ||| || | |||| Sbjct 1145562 CTTGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCT---TGGCAA 1145506 Query 125777 CAAGATTTAC---AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833 ||| | ||| || |||| || || ||||| |||||| || ||| || || | || Sbjct 1145505 CAACAAGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGG 1145446 Query 125834 TAAGACCAACTTTTTCGAGAAG 125855 |||||||||||| ||||||||| Sbjct 1145445 TAAGACCAACTTCTTCGAGAAG 1145424 Score = 118 bits (130), Expect = 2e-21 Identities = 195/279 (70%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| ||||||| || ||||| | ||| || | ||||| Sbjct 1146303 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 1146244 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | || ||| ||| ||||| || || || Sbjct 1146243 TCTAAGGATCTTCACGACTGGCACAACCGCCTGAATGATGACGAGCGCTTCTTCATCTCT 1146184 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 | | | | ||||||||||| | |||||| || || |||||||| || ||| | || Sbjct 1146183 CGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAGCGT 1146124 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257 ||| |||| || || || |||| ||| ||||| ||||| ||||| || ||||| Sbjct 1146123 TTCAGCGGAGAGGTGCAGATCCCTGAGG-CTCGTTGCTTCTACGGTTTCCAGATTATGAT 1146065 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 |||||| | ||| | || | |||||| |||||||| Sbjct 1146064 CGAGAACATCCACGCTGAGACCTACTCTCTTCTGATTGA 1146026 >seq3 Length=2648250 Score = 89.7 bits (98), Expect = 8e-13 Identities = 213/318 (67%), Gaps = 8/318 (3%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || ||||| | ||| ||| | || || |||||| | ||| ||| || || || | Sbjct 243356 ACCAACGGTTCCTCCAATGGTATTGTTCCCATGCTCCGGGTGTTCAACAACACTGCCA-G 243298 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 ||| || ||||| || || || || ||||| ||| | ||| | |||||||| ||||| Sbjct 243297 ATATGTAGACCAGGGAGGAAACAAGCGTCCAGGTGCTTTTGCCATTTACTTGGAGCCTTG 243238 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC- 96984 |||||| || || || || || |||| | ||||| ||| || | |||||| | Sbjct 243237 GCACGCCGATGTCTTCGAGTTCCTCGATCTCCGCAAGAACCACGG---TAAAGAGGAAGT 243181 Query 96985 --GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA 97042 ||||| | || | || ||||| |||||| || || |||||||||||||| || | Sbjct 243180 GAGAGCCCGCGATCTCTTCTATGCCCTCTGGACTCCGGACTTGTTCATGAAGCGAGTTGA 243121 Query 97043 CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTG 97102 | | ||| |||||| || | || || || | | || || || ||||| | Sbjct 243120 AGCCAACGGCGACTGGACTCTCTTCTGTCCTAACGAGGCCCCTGGCTTGGCCGATGTTTA 243061 Query 97103 GGGCGAAGAGTTTGAGGC 97120 || || || |||||||| Sbjct 243060 TGGTGACGAATTTGAGGC 243043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058338518680