Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6 136 4e-27 seq1 122 8e-23 seq3 104 2e-17 >seq6 Length=2060378 Score = 136 bits (150), Expect = 4e-27 Identities = 343/514 (67%), Gaps = 13/514 (3%) Strand=Plus/Minus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAAC-AGCAGCACCGCGAC 46145 || ||| | || ||||| | |||||||| || |||||| | | ||| | |||| Sbjct 1145915 CCTTGCATTCGTAAGAAGGCTGACTGGGCTATCCGCTGGATCCAGGATCAGGAGT-CGAC 1145857 Query 46146 TTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTT 46205 |||| ||||| | |||||||| || ||| ||||| |||| || || || || Sbjct 1145856 CTTCGGTCAGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTT 1145797 Query 46206 TGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265 |||| | ||||| | | || | ||| | |||||||| || || || |||||| Sbjct 1145796 TGCCTCTATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGA 1145737 Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCG 46325 ||| || || || || ||||| || || || |||||||| || || || | | | Sbjct 1145736 GCTTATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTT---CTCGCA 1145680 Query 46326 CGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTT--CAAGGAGGCGGTGGCC 46383 | || || || | | || | | ||| ||| | ||| | ||| || || || Sbjct 1145679 CCTGAACAACCGCCCCGACCCTCAGATTGTG--GAGGACGTTATCGTGGAAGCTGTCTCC 1145622 Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAG 46443 |||||||||||||| | || | ||| || || || || || ||||||||| | | Sbjct 1145621 ATTGAGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAAC 1145562 Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTT--CACCAGC 46501 | |||||| | ||||| ||||| || || ||||| || || || ||| || || | Sbjct 1145561 TTGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAAC 1145502 Query 46502 CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCA 46561 ||| | || | || ||| |||||||| || ||| ||||||||||||||| || | Sbjct 1145501 --AAGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTA 1145444 Query 46562 AAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 | || || || ||||| ||||| ||||| || || Sbjct 1145443 AGACCAACTTCTTCGAGAAGCGTGTCGGTGATTA 1145410 >seq1 Length=3471301 Score = 122 bits (134), Expect = 8e-23 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| |||||| ||||| |||||||| || ||| ||| Sbjct 909350 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 909409 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||| || ||||| || || ||||| ||| || ||||| | | Sbjct 909410 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 909469 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||| | ||||| ||||| ||| ||||| || || || || |||| Sbjct 909470 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 909529 Query 131225 AA 131226 || Sbjct 909530 AA 909531 Score = 116 bits (128), Expect = 3e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| ||||| ||||| || || || | || || ||||| ||||||||||| || | Sbjct 258213 CCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGAC 258154 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| |||| |||||||||||||| || || Sbjct 258153 AGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGA 258094 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| |||||| ||| | | || | |||||| | ||||| | Sbjct 258093 ATGCCTTCTTTGTCCTGGATTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAACC 258034 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||| | || || || || || || || |||| Sbjct 258033 TCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGA 257997 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || ||||| || || |||||||||||| | Sbjct 258441 CCACCACGAAGACGGAGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGAC 258382 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| ||| | || | |||||||||||| ||||| Sbjct 258381 AAAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGA 258322 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| ||||| || ||| | | || ||| | | || | || |||| || || | Sbjct 258321 ATTCCCTCTTTATC-TTGAATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAAC 258263 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || ||||| ||||| || |||||||||||||| Sbjct 258262 CTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 258215 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||| |||||||| || |||||||| || Sbjct 1639242 CCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1639301 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 1639302 AGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGG 1639361 Query 131128 ATTCCTTCTTTGTC 131141 ||||| || ||||| Sbjct 1639362 ATTCCCTCCTTGTC 1639375 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||| || || |||| ||| |||||| ||||| ||||| || Sbjct 258669 CCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAG 258610 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||||||||||||||| || |||| | ||| |||||||| || || Sbjct 258609 AGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGA 258550 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | ||| || | | || | Sbjct 258549 ATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACT 258490 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || ||||| |||||||| Sbjct 258489 TCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 258443 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||| |||||||| || ||||| || || Sbjct 257911 CCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAG 257852 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| ||| |||| | ||||||||||| ||||| Sbjct 257851 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGA 257792 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || || || ||||| | || | ||| ||| | ||||||| Sbjct 257791 ATGCCTTCCTTATCCTGAATCTTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTCGACC 257732 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | || | ||| || ||||| Sbjct 257731 TCCAAAGTGATGGTCTTGCCGGT 257709 >seq3 Length=2648250 Score = 104 bits (114), Expect = 2e-17 Identities = 174/248 (70%), Gaps = 8/248 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| ||||| || || | ||||| || | || | ||| || ||| | || Sbjct 242176 TTGACGACCTGGAACTCACCCGCAAGGACACGGCGGGAGTAGATGTTCGAGGTGTAAGGC 242235 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||||| ||| ||| ||| ||||||| |||||| |||||| Sbjct 242236 TCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTGCTTGCGGTCGGCATGGGCGCCACT 242295 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTC-CTTT---AGCGTACCCCAATC 145233 | || ||||||| ||| || || ||||| |||| ||||| |||| || Sbjct 242296 AGCAAGCTGTTGCGCACACCGGTCTGGGCGA--TCTTCGCTTTGAGAGCGT--CCCAGTC 242351 Query 145234 CCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGG 145293 ||| || ||| || || |||||||||||||||||| | |||||||| | | |||| Sbjct 242352 CCAGAGATCAGTGGGGGTCCGGTCCCACATGTCGTACTGAAGAATGCCCTGGGAGACGGG 242411 Query 145294 GCTGCCTT 145301 ||||| Sbjct 242412 AGAGCCTT 242419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012251285120