Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq6 141 2e-28 seq15 114 3e-20 seq10 114 3e-20 >seq6 Length=2060378 Score = 141 bits (156), Expect = 2e-28 Identities = 274/401 (68%), Gaps = 4/401 (1%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || |||| ||||| ||||||||||| || ||||| ||| Sbjct 1145428 TCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATGAAGTCAAATGGGTTGGTG 1145487 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 |||||| | | |||| | |||||| || || | || ||||| || || ||||| | Sbjct 1145488 GCATTGAAGTACTTGTTGTTGCCAAGAGCGACCAGGAGACGGTCGGCGACGAACTCAATG 1145547 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||||| | ||||||||||||| | | ||||||| || ||| | | Sbjct 1145548 TACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCGCAAGGAAGAGCGTCAGTCAGG 1145607 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC-CTGTGCCAGAGAC-A 251800 || ||||| || ||| || || ||| | | || ||| ||| | || || | | Sbjct 1145608 AACTCCTTCTCAATGGAGACAGCTTCCACGATAACGTCCTCCACAATCTG--AGGGTCGG 1145665 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 | ||| | ||| | ||| | || || |||| | ||| |||||||| || | Sbjct 1145666 GGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCATCAC 1145725 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 || ||| | ||||||||| | || || ||||||| ||||| ||| | ||||||| Sbjct 1145726 GAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGA 1145785 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||| | | ||||||||| ||||| | | |||||| ||| Sbjct 1145786 AGATAGAGGCAAAGGATCCGGAGAAGAAGATACCCTCAACA 1145826 >seq15 Length=1366461 Score = 114 bits (126), Expect = 3e-20 Identities = 412/636 (65%), Gaps = 14/636 (2%) Strand=Plus/Minus Query 218440 GATGAGCGCAAGACCTGGCTGCTCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAG 218499 |||||||||||| ||||||| | ||| |||| |||| | ||||| || || | Sbjct 905806 GATGAGCGCAAGGAGTGGCTGCGTCAATTCAAGCCGGGAACCTTCTTGGATCACTCAGTG 905747 Query 218500 ACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTA 218555 |||| || | | | ||||||||| ||||||||||||| || ||| | |||| | Sbjct 905746 TCCAAGATTTCATACACCGACTTCATCAACAAGGAGCTCATCCTATTCAGTATGGCGG-A 905688 Query 218556 TGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGAT 218615 |||| || || ||||| || ||||||||||||||||| || |||||| | Sbjct 905687 CAATGT---CCGATCGATTCCTTCGGTCGTGGATGGCCTCAAGCCCGGTCAACGTAAGGT 905631 Query 218616 CCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGG 218675 || | | | ||| || |||||| | || || ||||| | | || | || Sbjct 905630 TCTTTATACTTGTTTCCGACGCAACCTGAAGAAGGATATGAAGGTGGTCGAATTAGCGGG 905571 Query 218676 TTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGT 218735 | | || || | || ||| || || |||||||| |||||| |||| || Sbjct 905570 TCACGTTTCGGGTATGACTGCGTATCAACACGGTGACATCTCCCTGCAGCAGACCATCGT 905511 Query 218736 AGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCA 218795 ||| |||||||| || || || ||||| | |||| ||| |||| ||| | Sbjct 905510 CGGCCTGGCACAGAGCTTCGTCGGGTCCAACAATGTAAACTGTCTGGAGCCCAGTGGTAA 905451 Query 218796 GTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAA 218855 |||||| |||||| ||||||| || |||| ||| | ||||||| || Sbjct 905450 CTTTGGTAGTCGTCTCCAGGGTGGATCAGACTGTGCCAGTGCTCGTTATATCTACACTCG 905391 Query 218856 GTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATG-TGCTC--CTTAAGTA 218912 ||||| |||| ||| | | ||| || || || |||||| | ||| |||| || Sbjct 905390 CCTGTCG-CCGT-TCGCTCGACGTG-TCTTCCATGCTCATGATGATCCTCTACTTACTTA 905334 Query 218913 TCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTT 218972 ||||| |||||| || ||||| || || ||||| | |||| | | Sbjct 905333 CAACGAGGATGATGGTGAAAAAATCGAGCCGGAAATCTACGTGCCCGTCGTTCCCATGAT 905274 Query 218973 GCTCGTAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAA 219032 || || || ||||| | |||||||| || || | ||| | ||| ||| ||||| Sbjct 905273 CCTGGTTAACGGTGCTGACGGTATCGGCACCGGCTGGAGTTCATCCATCCCTAACTACAA 905214 Query 219033 TCCCAAGGACATCATTGACAACGTCAAGCGTCTCAT 219068 ||| |||||||| | |||||| | ||||| ||||| Sbjct 905213 CCCCGAGGACATCGTGGACAACCTTAAGCGACTCAT 905178 >seq10 Length=1860928 Score = 114 bits (126), Expect = 3e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| ||||| || || ||||||| ||||| |||| ||| Sbjct 744112 GGTGAGGATCTGTGCAACTGCACGTTCTCCCTGGCCTATGGTGCCAAGATCTTGCTGAAC 744053 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| | | |||||||| | || || |||||| |||||||||| || | Sbjct 744052 CAGACCCATCTCCGCCTGAAGCGTGGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTACT 743993 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| |||||| ||||| || || |||| ||||| || || || || || Sbjct 743992 GGTAAGACCACTCTCATGCGTGCTATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 743933 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || ||||||||| | || || Sbjct 743932 GATGAGGTCAAGACTGTCTACGTTGAGCACGACTTGGATTC 743892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835575268213