Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq6 201 2e-46 seq3 132 9e-26 >seq6 Length=2060378 Score = 201 bits (222), Expect = 2e-46 Identities = 349/504 (69%), Gaps = 9/504 (2%) Strand=Plus/Minus Query 42645 AAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGG 42704 |||||||| |||||||| || ||||||| || || || | || ||||| || | Sbjct 1145903 AAGAAGGCTGACTGGGCTATCCGCTGGATCCAGGATCAGGAGTCGACCTTCGGTCAGCGT 1145844 Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || ||||| |||| || ||||| ||||||||||| || |||| ||||| |||||| Sbjct 1145843 CTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTTGCCTCTATCTTC 1145784 Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 ||||| ||| || | | ||||||||| || || ||||| ||||| || ||| | Sbjct 1145783 TGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCGT 1145724 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884 || ||||| || || | |||||||| ||||| || |||||| ||||| | |||| Sbjct 1145723 GATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCG---CACCT---GAACAAC 1145670 Query 42885 C-CCTCGA--AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAG 42941 | || ||| || || || | | ||| ||| || || || ||||||||| Sbjct 1145669 CGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAGGAG 1145610 Query 42942 TTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAG 43001 ||||| || | | || || | || | ||||||||| | || | |||||| || Sbjct 1145609 TTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGCCAG 1145550 Query 43002 TACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAAC 43061 ||||| ||| ||||||||||| ||||||| | | || || | || ||| Sbjct 1145549 TACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTTCAAT 1145490 Query 43062 ACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTC 43121 | | ||| || ||||| ||||| |||||||| ||| || ||||||||||| ||| Sbjct 1145489 GCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAACTTCTTC 1145430 Query 43122 GAGAAGCGCGTCGCCGACTACCAG 43145 |||||||| |||| || |||||| Sbjct 1145429 GAGAAGCGTGTCGGTGATTACCAG 1145406 Score = 111 bits (122), Expect = 3e-19 Identities = 182/259 (70%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| ||||||||||||||| ||||| || Sbjct 1146303 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 1146244 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415 | ||||| || |||| | || | |||| || |||| || ||| || Sbjct 1146243 TCTAAGGATCTTCACGACTGGCACA-ACCGCCTGAATGATGACGAGCGCTTCTTCATCTC 1146185 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 | |||| |||||||| || ||||| |||||||| ||||| || |||||| | | Sbjct 1146184 TCGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAGCG 1146125 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| |||||||||| | |||||| || ||||||||||| |||||||| || Sbjct 1146124 TTTCAGCGGAGAGGTGCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATTATGAT 1146065 Query 42536 AGAGAACGTGCACTCTGAG 42554 |||||| | ||| ||||| Sbjct 1146064 CGAGAACATCCACGCTGAG 1146046 >seq3 Length=2648250 Score = 132 bits (146), Expect = 9e-26 Identities = 318/474 (67%), Gaps = 8/474 (2%) Strand=Plus/Plus Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 || || | |||| |||| |||||| | | | || | || |||||| | ||| || || Sbjct 243091 GGACAGAAGAGAGTCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTC 243150 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGC 245089 |||||||| | |||||| || | || ||| || || || |||||| | || Sbjct 243151 CAGAGGGCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGA 243210 Query 245090 TCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGC 245149 || | || || ||||| ||| ||||||| ||||||| ||| | || | || || || Sbjct 243211 TCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGA 243270 Query 245150 CGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAG 245207 |||||||| ||||||||||| | ||| ||| | || | |||||| | || || | | Sbjct 243271 CGCTTGTTTCCTCCCTGGTCTA-CAT-ATCTGGCAGTGTTGTTGAACACCCGGAGCATGG 243328 Query 245208 GCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA--G 245265 | || || || || ||| |||||||| || ||||||| ||| | | | || Sbjct 243329 GAACAATACCATTGGAGGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGC 243388 Query 245266 GTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGAT 245325 | ||| || || | || | ||| || ||| ||| ||||| | || || |||||| Sbjct 243389 GGTGCACATTGAGA--CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAG 243446 Query 245326 GGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAG 245385 ||||| || || || ||||| ||| |||||| | || |||||||| || | || Sbjct 243447 CGTGTCATAAATACCTTCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAG 243506 Query 245386 CTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 ||| |||| ||| | | | ||||||| ||| || ||| ||||| || || Sbjct 243507 CTGAGGCTGAGGGGTACCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATA 243560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338102205680