Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq6 109 1e-18 seq15 98.7 2e-15 seq10 89.7 1e-12 >seq6 Length=2060378 Score = 109 bits (120), Expect = 1e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 243526 GAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTC 243585 || ||||| ||| | |||||| |||| ||| ||| ||||||||||||| | | Sbjct 1145618 GAGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTG 1145559 Query 243586 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAA 243645 ||| | |||||||| || ||||| |||||||| | | |||| ||||| | | || Sbjct 1145558 ATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAG 1145499 Query 243646 GTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACT 243705 | ||| ||| ||||| |||| ||| ||||| ||| || || || || || Sbjct 1145498 TACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACC 1145439 Query 243706 AACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 ||||||||||| ||||||||| ||||||| || ||||||||||| Sbjct 1145438 AACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAAGCTGGTGTGATG 1145391 >seq15 Length=1366461 Score = 98.7 bits (108), Expect = 2e-15 Identities = 244/365 (67%), Gaps = 4/365 (1%) Strand=Plus/Plus Query 298087 GATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATT-TCTAGAAGATTAGGGAAACAGC 298145 ||| ||||||||||||| | | |||| | || || || | ||| | || | || Sbjct 906065 GATGGGCGTGATGAACTCGATGAGGAACTCGGGGATCCTCAACAAGCTCGGGAATTGGGC 906124 Query 298146 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 298205 | || |||||||| |||| | ||| ||||||| || ||| |||| ||||||| Sbjct 906125 T-TGCAAAAAGTTAATGAGCAAACCCTTGATGTGAGAACCATCATGATCCTGATCGGTCA 906183 Query 298206 TGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAA 298265 ||||||||| ||| || ||||| ||| || || |||| |||| | || | Sbjct 906184 TGATCATCAGATGTCCATAACGCAGCCCACGGGTATCCGTGTATTCTTTCTTGTGCTGCA 906243 Query 298266 GGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACGGAT 298324 || || | | ||||| | ||| ||||||| ||||||||| ||| | | | | Sbjct 906244 ACCCAAGGAAGTTTTTGATGTTCTG-GATTTCTGCGTTCTTCGAGATCTGTTCGAAAGTG 906302 Query 298325 GCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 298384 ||||| ||||| |||| || ||||| || || ||||| || ||| | || ||||| Sbjct 906303 GCATCACGGACGTTCAGCAGCTTTCCTCGGAGGGGGAAAACACCAAAGAGATCCGGACCG 906362 Query 298385 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 298444 ||||| | | || || || || || | ||||| || || || |||||||| || Sbjct 906363 ACCACCGCACGTCCAGCCATGGCCAGACCCTTGGCGGAGTCACCTTCTGTCAGAATCAGT 906422 Query 298445 GTGCA 298449 ||||| Sbjct 906423 GTGCA 906427 >seq10 Length=1860928 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202 ||||| || ||||| |||| || | ||||| |||||| || |||||||| || Sbjct 743901 TCGTGCTCAACGTAGACAGTCTTGACCTCATCCTTCTTGGGGAAACCCTCAAGCTGCTCG 743960 Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262 || ||||| ||||| ||||| | ||||| | ||||| || || |||||||| Sbjct 743961 TTGTTGATAGCACGCATGAGAGTGGTCTTACCAGTACCGTTGGGACCGAGGAGACCGTAA 744020 Query 334263 CGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCC 334322 || | ||||||||||| || | || | |||||| | || || ||||||| ||| Sbjct 744021 CGCTGACCACGCTTCAGGCGGAGATGGGTCTGGTTCAGCAAGATCTTGGCACCATAGGCC 744080 Query 334323 AGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || || || | |||||||||||||| Sbjct 744081 AGGGAGAACGTGCAGTTGCACAGATCCTCACC 744112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878685849550