Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 >seq1 Length=3471301 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | |||| ||||| |||| || ||| || ||||||||||| || Sbjct 258670 TCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGA 258611 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| ||| |||||||| || ||||| |||| | || ||||| || || || Sbjct 258610 GAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGG 258551 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || ||||||||||| ||| || ||||| |||| |||| ||||||| || || | Sbjct 258550 AATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTG-TCGATAGTGTCCGAGCTTTCAA 258492 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | || | || ||||| || || || || || || |||||||| Sbjct 258491 CTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 258443 Score = 95.1 bits (104), Expect = 1e-14 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| || || ||| ||||| Sbjct 909352 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 909411 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | |||||||| ||||| || || |||||||||||| ||| || ||||| |||| || Sbjct 909412 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TC 909470 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | ||| || |||| ||| | || || || || || || || || || Sbjct 909471 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 909530 Query 127105 A 127105 | Sbjct 909531 A 909531 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | ||||||||||| || || ||||||||| | Sbjct 258441 CCACCACGAAGACGGAGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGAC 258382 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || || ||| | || | |||||||| || ||||| Sbjct 258381 AAAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGA 258322 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||| || | | ||| | | || ||| | | |||| ||||| | || || Sbjct 258321 ATTCCCTCTTTAT-CTTGAATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAAC 258263 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| ||||| || || ||||||||||| Sbjct 258262 CTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 258215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500247230320