Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05]
93 sequences; 36,974,910 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 5e-19
>seq1
Length=3471301
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | |||| ||||| |||| || ||| || ||||||||||| ||
Sbjct 258670 TCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGA 258611
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| |||||| ||| |||||||| || ||||| |||| | || ||||| || || ||
Sbjct 258610 GAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGG 258551
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064
|| ||||||||||| ||| || ||||| |||| |||| ||||||| || || |
Sbjct 258550 AATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTG-TCGATAGTGTCCGAGCTTTCAA 258492
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| | || | || ||||| || || || || || || ||||||||
Sbjct 258491 CTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 258443
Score = 95.1 bits (104), Expect = 1e-14
Identities = 131/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||||| ||| || ||||| || || ||| |||||
Sbjct 909352 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 909411
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| |||||||| ||||| || || |||||||||||| ||| || ||||| |||| ||
Sbjct 909412 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TC 909470
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| |||||| | ||| || |||| ||| | || || || || || || || || ||
Sbjct 909471 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 909530
Query 127105 A 127105
|
Sbjct 909531 A 909531
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||| || | ||||||||||| || || ||||||||| |
Sbjct 258441 CCACCACGAAGACGGAGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGAC 258382
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || || ||| | || | |||||||| || |||||
Sbjct 258381 AAAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGA 258322
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| ||||| || | | ||| | | || ||| | | |||| ||||| | || ||
Sbjct 258321 ATTCCCTCTTTAT-CTTGAATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAAC 258263
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || ||||| ||||| || || |||||||||||
Sbjct 258262 CTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 258215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500247230320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |