Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq6 149 8e-31 seq3 113 6e-20 >seq6 Length=2060378 Score = 149 bits (164), Expect = 8e-31 Identities = 312/460 (68%), Gaps = 19/460 (4%) Strand=Plus/Plus Query 127221 CCAGCTTGCCG-TAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTG 127279 ||||||| | | || || ||||| ||||||||||||||||| ||||| || | ||| | Sbjct 1145398 CCAGCTTTCTGGTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAG 1145457 Query 127280 ATATTCTCCATAAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGCACCCCAA 127334 || || ||||| || ||||||||||| | |||| | | |||||| |||| Sbjct 1145458 ATGTTGTCCATGAAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTG-----CCAA 1145512 Query 127335 TCTGTTTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCA 127394 |||||||| || | |||| |||||||||||| ||||| | ||||||| Sbjct 1145513 GAGCGACCAGGAGACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCA 1145572 Query 127395 TACCGATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTT 127454 | || | || || || || ||||| | |||| ||||||||||| ||||||| Sbjct 1145573 TGCCAAGAAGAGCGCAAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTT 1145632 Query 127455 CCCGTACGATGGCGTGA---ATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAG 127510 || ||||| ||| | | | | | || | ||| | | || | |||| Sbjct 1145633 CC---ACGATAACGTCCTCCACAATCTGAGGGTCGGGGCGGTTGT-TCAGGTGCGAGAAG 1145688 Query 127511 AGTTCCACAGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAG 127570 || |||||| || |||||||||||| ||||| ||||| || || || ||||| Sbjct 1145689 AGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAT 1145748 Query 127571 CACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAG 127630 ||||| ||||| | || |||||||||| |||||| || | ||| || || ||| Sbjct 1145749 GTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGATCCGGAG 1145808 Query 127631 AAGAAGATCCCCTCCACACACGCGAACGCAAATAGACGCT 127670 |||||||| ||||| ||| ||||| || | ||||||| Sbjct 1145809 AAGAAGATACCCTCAACAGCGGCGAAGGCCACGAGACGCT 1145848 >seq3 Length=2648250 Score = 113 bits (124), Expect = 6e-20 Identities = 575/907 (63%), Gaps = 26/907 (3%) Strand=Plus/Plus Query 115719 GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 115778 ||| ||||||||||| |||||||| ||| ||||| | ||||| | ||| || || Sbjct 242031 GATCTCCCACACAGTCTTGTAGAGGGCCTTGATATCCGCGGGGATGTTAGGGATGTTCTG 242090 Query 115779 GATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAAT 115835 || |||||||| || | | |||| | | |||||| | | ||||| ||||||| Sbjct 242091 GACGGAGCCACC---CTCGGCAATGATACGGTTCTTCATGTTGTCCGACCACAGACCAAG 242147 Query 115836 CTTCTTGAGATCCTCCACGAGGTGCTTA---TTGACAACAACAAACTCACCCGCGAGGGT 115892 | | |||| ||| || | ||||| || ||||||||||| ||| Sbjct 242148 GTCGACCAAGTCCTT---GAGAAGCCAAGGGTTGACGACCTGGAACTCACCCGCAAGGAC 242204 Query 115893 GCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTG 115952 || | |||||||| | ||||| ||||| |||||||| ||| |||||||| || Sbjct 242205 ACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTG 242264 Query 115953 GGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCT 116012 ||| || || |||||||| |||| || | ||||||||| | ||| | Sbjct 242265 ACTGGTGCTTGCGGTCGGCATGGGCGCCACTAGCAAGCTGTTGCGCACACCGGTCTGGGC 242324 Query 116013 AATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TCCCACATAT 116071 || | ||||| ||||||||||| || || | || || |||||||| | Sbjct 242325 GATCTTCGCTTTGAGAGCGTCCCAGTCCCAGA-GATCAGTGGGGGTCCGGTCCCACATGT 242383 Query 116072 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 116131 | |||| || || || ||||| | || || || ||| ||| ||| || | || Sbjct 242384 CGTACTGAAGAATGCCCTGGGAGACGGGAGAGCCTTCATATGACTCGTACGTTCCGAAGT 242443 Query 116132 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAG 116191 ||| |||| || || || | ||| |||| || || ||||| || || | | Sbjct 242444 CCTTGGCCAGGTCAGATGAAGCAGTCAAAGCTCCGTGGTAGATGGTCTCGAAGATTTGGG 242503 Query 116192 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCG 116251 || | ||| |||||| || || || | | ||| || || |||| | Sbjct 242504 TGTTTAGCTGCTTCGCCTCGGGTGAGTCGAATGGCAAACGAAGGGCAAGGAAGGCATCAG 242563 Query 116252 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT 116311 | ||||| | |||||| || |||| ||||| || | ||| || | ||| | | || Sbjct 242564 CCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTT-GCTGTTCTTG--GCCT 242620 Query 116312 CC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 116368 | || || || |||| ||||||| | | | || || || | |||| Sbjct 242621 CAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGTACCTGCA 242680 Query 116369 TGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAG 116425 | ||| || ||||| | | ||| | || ||| | | ||| || | | | Sbjct 242681 CAACTTCGTGGAGCTTGCCAAAGTCATATTCACCGCGGGCAGCATCAACGA---AGGTGG 242737 Query 116426 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 116485 | ||||| | || || || || || |||| ||||||| | |||||||||| || | Sbjct 242738 GCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATGA 242797 Query 116486 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 116545 |||| ||||| | || || || || || |||| |||||| || || |||| ||| Sbjct 242798 TTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTGT 242857 Query 116546 TACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 116605 |||| ||||||||||| ||||| | || | || ||||| || || | || ||||||| Sbjct 242858 TACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATAG 242917 Query 116606 CCTTCCA 116612 | | ||| Sbjct 242918 CATACCA 242924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506486797880