Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 6e-15 seq3 87.8 3e-12 >seq6 Length=2060378 Score = 96.9 bits (106), Expect = 6e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || ||||| |||||||| ||| || ||||| || |||||||| | ||||||||| Sbjct 1145686 AAGAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAG 1145745 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | || || ||||| | |||||| || ||||| || || | ||||| | ||| Sbjct 1145746 AATGTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGATCCG 1145805 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||| ||||| || || || || |||||||| | || ||| || | | | Sbjct 1145806 GAGAAGAAGATACCCTCAACAGCGGCGAAGGCCACGAGACGCTGACCGAAGGTCGACTCC 1145865 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTT 160131 || ||| |||| | | ||||| ||||||||||| Sbjct 1145866 TGATCCTGGATCCAGCGGATAGCCCAGTCAGCCTTCTT 1145903 >seq3 Length=2648250 Score = 87.8 bits (96), Expect = 3e-12 Identities = 161/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 204185 GGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAAT 204244 ||||||| || ||| || || || | || || | |||| | | | ||| |||| | Sbjct 242173 GGGTTGACGACCTGGAACTCACCCGCAAGGACACGGCGGGAGTAGATGTTCGAGGTGTAA 242232 Query 204245 GGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCC 204304 || ||||| ||||||| ||| || |||||| |||||| || || |||||||| ||| Sbjct 242233 GGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTGCTTGCGGTCGGCATGGGCGCC 242292 Query 204305 AGGAGCAGGGAGTTGCGCACACCGTATTTTTGGAC--CCTGCGC-TTCAGAGAGGTCCAG 204361 | |||| | ||||||||||||| | ||| | || ||| || |||| | |||| Sbjct 242293 ACTAGCAAGCTGTTGCGCACACCG---GTCTGGGCGATCTTCGCTTTGAGAGCGTCCCAG 242349 Query 204362 TCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTG 204414 || | || |||| || | ||||||||||| |||||| ||||| || Sbjct 242350 TCCCAGAGATCAGTGGGGGTCCGGTCCCACATGTCGTACTGAAGAATGCCCTG 242402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154275632080