Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq8 129 7e-25 seq3 114 2e-20 seq1 100 3e-16 seq6 89.7 6e-13 >seq8 Length=2027757 Score = 129 bits (142), Expect = 7e-25 Identities = 286/419 (68%), Gaps = 25/419 (6%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||||||||| || || || | ||||| | || |||| |||| | ||||||| | Sbjct 612821 CGATCGAAACGTCCAGGCCGCATCAGAGCCTTGTCCAGAACATCGGGTCTGTTTGTACCA 612762 Query 11563 GCAATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | ||| || | | |||| ||| |||||| |||||||| || |||| |||| Sbjct 612761 GCCAAGACAACCA---CTTGCTCAGAGGTGTTGAAACCATCCATTTCAGTAAGAATCTGG 612705 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCT--GCCGAAC---GCT-TC 11673 || | ||| ||||||||||| || |||||| || | ||| || Sbjct 612704 TTCAGCGTGCTCTCACGCTCATCATTTCC------ACCACCAAAGCTTTGCTTTGCTCTC 612651 Query 11674 ---TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 ||||| | || || |||||||| ||||| | ||| || || ||| ||| || Sbjct 612650 GATTTACCTATGGCATCGATCTCATCAATGAAGATGATGCAAGGCGTGTTCTTACGAGCA 612591 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 | | || || ||||| ||||| | ||||||||| ||||||||||||||||| | | Sbjct 612590 TTGGCAAAGAGATCACGGACACGGGAAGGTCCAACACCAACGAACATCTCAACGAACTCT 612531 Query 11791 GCGGCA-GAACACTGAATGAAGGGAACATTAGACTCACCAG-CGATGGCTCGAGCGAGGA 11848 | || || || || ||| |||||| ||| ||||| | || || || | || || | Sbjct 612530 GAACCACTGACGCT-AAAGAACGGAACACCAGATTCACCGGCCGTTGCCTTG-GCAAGCA 612473 Query 11849 GAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907 | |||||||| ||||| || | ||||| |||| ||| || || || ||||| |||||| Sbjct 612472 GTGTCTTACCAGTACCGGGAGGACCAGAAAGAATGGCACCGCGAGGAATCTTAGCACCA 612414 >seq3 Length=2648250 Score = 114 bits (126), Expect = 2e-20 Identities = 428/665 (64%), Gaps = 7/665 (1%) Strand=Plus/Plus Query 110531 CCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGG 110590 |||||||||| | || || ||||| | | || |||| || ||||||||||| | Sbjct 243044 CCTCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAG 243103 Query 110591 ACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGA 110650 ||| | || | ||||| | ||||||||||| ||| ||| |||| | || ||| Sbjct 243104 TCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGCATAGA 243163 Query 110651 AAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCA 110710 | || || ||| | | || || | ||| ||||| ||| || || | || || | Sbjct 243164 AGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGA 243223 Query 110711 TGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGA---CCCG 110767 || ||| | |||||| || || | || | || | | || ||| || Sbjct 243224 AGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTC 243283 Query 110768 CCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGG 110827 |||||| ||||| | || ||| ||||| |||| |||||| |||| ||| |||| || Sbjct 243284 CCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGG 243343 Query 110828 ATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATAC 110887 | ||| || ||||| | ||| ||| | ||||| ||| ||| | || | || Sbjct 243344 AGGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTGAGAC 243403 Query 110888 CAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCA 110946 | || ||||| || ||| || |||||| ||| |||| || |||||||||| Sbjct 243404 CGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCT-TGAGCGTGTCATAAATACCT 243462 Query 110947 TCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTT 111006 || || ||| |||| | | | |||||||| |||| | |||||| |||| || Sbjct 243463 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 243522 Query 111007 CCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTA 111065 || |||||||| | || || | ||||| |||| | || | || |||||| || || Sbjct 243523 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAA-ATACTTCTGAGACATCAAGTGATA 243581 Query 111066 TGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACAT 111125 || |||| || | || ||||| |||||||||| | || ||||| || | Sbjct 243582 GGTCTCGATAGCCTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAAG 243641 Query 111126 ATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGT 111185 | ||||| ||| | ||||||||||| || | | ||| | ||| || || Sbjct 243642 GTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACCGCTCAAGAGT 243701 Query 111186 CTTGA 111190 ||||| Sbjct 243702 CTTGA 243706 >seq1 Length=3471301 Score = 100 bits (110), Expect = 3e-16 Identities = 267/408 (65%), Gaps = 9/408 (2%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651 ||| ||||| | ||| |||||||||||||| | ||||||| | ||| ||| Sbjct 595687 GAATCCGTCAAGTTCCGTGAGAAGCTGGTTCAGTGTCTGTTTAA---CAT------AGGC 595637 Query 11652 CATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACA 11711 | | | | | | | |||| ||| | || || | |||||| ||||| | |||| Sbjct 595636 CGCATCCCTTTCGTTCCTCTTCGCACCTATGGCATCCAGCTCATCAATGAAGATGATAGC 595577 Query 11712 CGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTAC 11771 ||| ||| ||||| || ||| |||||||| |||||||| || || ||||| || Sbjct 595576 AGGTGCCTTGCTTCGTGCTTGAGTGAACAGTTCACGGACACGCTTGGCACCTACACCAAC 595517 Query 11772 GAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGC 11831 | ||| || |||| | | |||| | | ||| || ||| || ||| || || Sbjct 595516 GTACACTTCGTCGAACTCAGAACCAGACATGTAGAAGAAAGGCACACCAGCCTCTCCTGC 595457 Query 11832 GATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACG 11891 | ||| || || || || ||||| || |||||||| | ||| | ||||| |||| Sbjct 595456 TACGGCACGGGCCAGCAGCGTCTTTCCGGTACCAGGAGGGCCAACAAGAAGCACGCCCTT 595397 Query 11892 GGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTC 11951 || | |||| ||||| | | || || || ||| ||||| || || | ||| Sbjct 595396 CGGCAACTTGCCACCAAGAGAGGAAAATCGTTCTGGGTTCAGCAGGAATTCAACCAGCTC 595337 Query 11952 CTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAAACG 11999 || |||||| ||||| || |||| || | ||||||||||| || Sbjct 595336 CTGAAGTTCTTCCTTAGCTTCGTCGCAGCCATGCACATCGGTGAATCG 595289 >seq6 Length=2060378 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 1235883 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 1235942 Query 136777 GGGAACAGCTTTTA 136790 |||| || ||||| Sbjct 1235943 GGGATCATTTTTTA 1235956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975315315400