Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 114 2e-20 seq6 109 6e-19 seq8 82.4 9e-11 >seq3 Length=2648250 Score = 114 bits (126), Expect = 2e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || ||||| | || || | ||||| ||||| ||||||| | | |||||||| | Sbjct 242737 GGCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATG 242796 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 ||||| ||||| | |||||| || ||||| |||| ||||| ||||| |||||| || Sbjct 242797 ATTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTG 242856 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 || || ||||||||||| |||||| | || | || ||||| ||||| | || ||||| Sbjct 242857 TTACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATA 242916 Query 106637 GCCTTCCA 106644 || | ||| Sbjct 242917 GCATACCA 242924 Score = 84.2 bits (92), Expect = 3e-11 Identities = 203/307 (66%), Gaps = 9/307 (3%) Strand=Plus/Plus Query 106700 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 106759 ||||| || ||||| || ||||| | |||| | || || |||| || |||||| Sbjct 243037 TAGAGTGCCTCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAG 243096 Query 106760 AAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 106819 || |||| ||| | || | ||||| ||||||||||| | ||| ||| |||| ||| Sbjct 243097 AAGAGAGTCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGG 243156 Query 106820 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 106879 | | |||||||| | | | || || | ||| ||||| || | || ||| Sbjct 243157 GCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGG 243216 Query 106880 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC 106939 ||||| | || ||| |||||||| ||||| | || | || | || || | ||||| Sbjct 243217 AACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACC---TGGACGC 243273 Query 106940 ------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 106993 || | || | |||||| | || ||| ||| || || || ||||| |||| | Sbjct 243274 TTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACA 243333 Query 106994 ATACCAT 107000 ||||||| Sbjct 243334 ATACCAT 243340 >seq6 Length=2060378 Score = 109 bits (120), Expect = 6e-19 Identities = 298/453 (66%), Gaps = 10/453 (2%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || || || |||||||| |||||||||||||| || | ||| ||||| ||||| Sbjct 1145410 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATG 1145469 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTGTTTGAGGAGAC 117103 ||||||||||| || | || || | | | | || || || ||||||| Sbjct 1145470 AAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCC--AAGAGCGACCAGGAGAC 1145527 Query 117104 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTAC 117163 | || | || |||||||||||| | ||||| | |||||||| || | ||| | Sbjct 1145528 GGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCGC 1145587 Query 117164 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 117223 | || || ||||| | |||| | |||||||| || || || |||||| ||| Sbjct 1145588 AAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTC---CACGATAACGT 1145644 Query 117224 GG---ATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 117280 | | | | | ||| | || || | ||||||| ||||| | Sbjct 1145645 CCTCCACAATCTGAGGGTCGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAAGCAAAGT 1145704 Query 117281 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGA 117340 | ||||||||||||||| || || ||||| || || ||||| || || ||||| | Sbjct 1145705 CAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCA 1145764 Query 117341 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 117400 || |||||||||| ||| | |||| | || || |||||||||||||||||||| | Sbjct 1145765 AGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGATCCGGAGAAGAAGATACCCTCAA 1145824 Query 117401 CACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 || || || || | || |||| |||||| Sbjct 1145825 CAGCGGCGAAGGCCACGAGACGCTGACCGAAGG 1145857 >seq8 Length=2027757 Score = 82.4 bits (90), Expect = 9e-11 Identities = 215/326 (66%), Gaps = 19/326 (6%) Strand=Plus/Minus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 ||||||||||| || || | || ||||| | || || || |||||||| | Sbjct 612731 AAACCATCCATTTCAGTAAGAATCTGGTTCAGCGTGCTCTCACGCTCATCATTTCC---- 612676 Query 9342 ATACCACCA--GCACTGCGTTGCTTTC-------CCACGGCATCAATCTCATCAATGAAG 9392 ||||||| || ||| ||||| || | | |||||| ||||||||||||||| Sbjct 612675 --ACCACCAAAGCTTTGCTTTGCTCTCGATTTACCTATGGCATCGATCTCATCAATGAAG 612618 Query 9393 ACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCC 9452 | || || || || | || || | |||||||||| || || | | || Sbjct 612617 ATGATGCAAGGCGTGTTCTTACGAGCATTGGCAAAGAGATCACGGACACGGGAAGGTCCA 612558 Query 9453 ACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAG 9510 |||||||| |||||||| || || | || | | || | | ||| || ||| || Sbjct 612557 ACACCAACGAACATCTCAACGAACTCTGAACCACTGACGCT--AAAGAACGGAACACCAG 612500 Query 9511 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 9570 ||||||| || | || ||| || || |||||||| ||||| || ||| | || | Sbjct 612499 ATTCACCGGCCGTTGCCTTGGCAAGCAGTGTCTTACCAGTACCGGGAGGACCAGAAAGAA 612440 Query 9571 GGGCACCCCGTGGAATCTTGGCGCCA 9596 |||||| || |||||||| || ||| Sbjct 612439 TGGCACCGCGAGGAATCTTAGCACCA 612414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980114147320