Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 109 4e-19 >seq1 Length=3471301 Score = 109 bits (120), Expect = 4e-19 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||||| || |||||||| || ||||| || || | ||| |||| || Sbjct 258651 ACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCCATCCTCT 258592 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || |||||||||||| | || | ||||||||||| Sbjct 258591 AGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGG 258532 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 ||||| ||||| | | ||||| | ||| || ||||| || | || || || Sbjct 258531 ATCTTTGACTTGAC----GTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGTGATAGT 258476 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||| ||||| || |||||||||||| Sbjct 258475 CTTGCCAGTGAGCGTCTTAACGAAGATCTGCATA 258442 Score = 84.2 bits (92), Expect = 1e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| ||| | || |||| || ||||| || ||||| || || Sbjct 909352 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 909411 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || |||||||| | || | ||||||||||| ||||| |||||| | Sbjct 909412 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 909471 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972 || | || | | |||||| |||| ||| ||||| || |||||||| ||||| || || Sbjct 909472 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 909530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633232048104