Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq15 96.9 3e-14 seq1 93.3 3e-13 >seq15 Length=1366461 Score = 96.9 bits (106), Expect = 3e-14 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || ||||| ||||| || || || ||| || |||||||| ||||| ||||| Sbjct 11959 GCGGTTATCACTGTGCCAGCCTACTTCAACGACAACCAGCGTCAAGCGACTAAGGATGCC 12018 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 ||| ||| | || ||||| || |||||||| ||||| ||||| ||||||||||| | Sbjct 12019 GGAGCTATCTCGGGTCTTAACGTCCTTCGTATCATCAACGAACCCACTGCTGCTGCCATC 12078 Query 550520 GCATATGGACTTG 550532 || || || |||| Sbjct 12079 GCCTACGGTCTTG 12091 >seq1 Length=3471301 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| || | || | ||| ||||| || |||||||| | | ||| | Sbjct 258432 AGACGGAGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGG 258373 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || || || ||||| ||||| || | ||||| |||||||||||||| ||| Sbjct 258372 CCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCT 258313 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGT 563435 ||||||||||| ||| || || || || || || | ||| | | || || || Sbjct 258312 TTATCTTGAATCTTTGACTTCACATTATCGATCGTGTC-GGATGATTCAACCTCCAGCGT 258254 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || || || || ||||| || |||||||| |||||| Sbjct 258253 AATTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCATA 258214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029291081740570