Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq20 132 4e-26 >seq20 Length=328506 Score = 132 bits (146), Expect = 4e-26 Identities = 406/628 (65%), Gaps = 21/628 (3%) Strand=Plus/Minus Query 29777 TGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGT 29836 ||||||||||| | ||||| || || || || || || ||||||||||| |||| | Sbjct 159229 TGGGCTCCCTCACCAGCTGCTCCTGCAAGGGCTCGACATGGTCCAGGTAGACATGAGTAT 159170 Query 29837 CTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACG 29896 | |||| || || ||||| || || | || | | ||||| ||||| | | Sbjct 159169 CACCCATGGCATGAACAAAGGTACCGGGATGCAGGTCCACAGCATGAGCAATCATATGGG 159110 Query 29897 TGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCT 29956 | | ||| | |||| ||| || || || || || ||||| | | ||| | ||| | || Sbjct 159109 TCAAGAGGGCGTAGGAGGCAATATTGAACGGCACGCCGAGGGCGACGTCACACGAGCGCT 159050 Query 29957 GGTAGAGCTGACAC--GAGA----------GCTCT---CC------GTCGCTCACGTAAA 29995 |||||||||| || |||| | ||| || || | ||||| | Sbjct 159049 GGTAGAGCTGGCAGTGGAGATGACCCTTCTGGTCTTGGCCATTGGGGTAGGAGACGTAGA 158990 Query 29996 ACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGG 30055 |||| | | || || || || || ||||| | || ||||||||||| Sbjct 158989 ACTGGGCGAACATATGACAAGGCGGGAGGGCCATCTTCTTGAGATCGGCGGGGTTCCAGG 158930 Query 30056 CGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCA 30115 ||| || ||||||||| | ||| ||||| ||| | | || |||| | | | Sbjct 158929 CGCTCATGATGATGCGGCGGTCGAAGGGGTTATTCTTCAGCTTGTGCACGACCTCGGCGA 158870 Query 30116 GCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAAT 30175 |||| || || || |||| |||||| | | ||| |||||| || ||||| | Sbjct 158869 GCTGGTCAACGCCTTGTCCCGTGTAGTCGGTTTTGGCGTCGACGTACTCGGCCCCGAAGT 158810 Query 30176 GCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCC 30235 | | ||| |||||||||||||| || ||||| || || | || | ||| || | ||| Sbjct 158809 GGCGCCATTGGAACCCGTACACGGGACCCAGATCGCCGACCTCGCGGTGGTCCAGGCCGA 158750 Query 30236 TCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGA 30295 |||||| | || || | | |||||| ||||||||||||| || || | ||||||| Sbjct 158749 CCTTGTCGAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACGCCTTGGTCGGAGA 158690 Query 30296 GCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCC 30355 || ||| ||| | || || |||||| ||||| || | |||||||| Sbjct 158689 GCGGCAGGGATGAGGTGCAGCCGGAGATGAACCAGAGCAGTTCGGCGACGACGGCGCGGA 158630 Query 30356 AAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 ||||| | |||||| || |||||||| Sbjct 158629 GGAAGACGCGCTTGGTGGTCAGGAGGGG 158602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617136857489