Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq6 113 8e-20 >seq6 Length=2060378 Score = 113 bits (124), Expect = 8e-20 Identities = 289/446 (65%), Gaps = 5/446 (1%) Strand=Plus/Minus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || ||||| || ||||| ||||| ||||| ||| ||| || ||||| | | Sbjct 1145848 AGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTTGCCTCTA 1145789 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATC 25995 |||||||||| ||| || || |||||||| || ||| || ||||||||||| ||| Sbjct 1145788 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCT-TACATTCTCCAACGAGCTTATC 1145730 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055 | || ||||||||||||| || ||||| |||||||||| | || ||| || | Sbjct 1145729 TCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCG---CACCTGAAC 1145673 Query 26056 CACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115 || || | ||| || | | ||| || ||||| || |||||| Sbjct 1145672 AACCGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAG 1145613 Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175 ||||| | | ||||||||| || | ||| || Sbjct 1145612 GAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGC 1145553 Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC 26235 || |||||||||| || ||||||| ||| ||| | || || | || || | Sbjct 1145552 CAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTTC 1145493 Query 26236 AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTC 26295 | | | | ||||| || ||||| ||||| ||||| || ||| || |||||||||||| Sbjct 1145492 AATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAACTTC 1145433 Query 26296 TTTGAAAAGAGGGTCGGCGACTATCA 26321 || || ||| | ||||| || || || Sbjct 1145432 TTCGAGAAGCGTGTCGGTGATTACCA 1145407 Score = 93.3 bits (102), Expect = 8e-14 Identities = 179/260 (69%), Gaps = 7/260 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||||||||| || |||||||| Sbjct 1146303 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 1146244 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTC-TCA 25591 | ||||| | ||| |||| || || || | ||||||| || | ||| || Sbjct 1146243 TCTAAGGATCTTCACGACTGGCACAACCGC-CTGAATGATGACGAGC-GCTTCTTCATCT 1146186 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 ||| | || |||||||| ||||| || || || || ||||| || ||| |||| Sbjct 1146185 CTCGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAGC 1146126 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | |||| | | || |||||| | ||||| || ||||||||||||||||| | Sbjct 1146125 GTTTCAGCGGAGAGGTGCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATTATGA 1146066 Query 25712 TCGAAAATGTGCACTCTGAG 25731 |||| || | ||| ||||| Sbjct 1146065 TCGAGAACATCCACGCTGAG 1146046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843720217920