Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05]
93 sequences; 36,974,910 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 8e-20
>seq1
Length=3471301
Score = 114 bits (126), Expect = 8e-20
Identities = 159/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||||||||| || | || | |||| ||||| | || ||||| | | |||
Sbjct 258436 ACGAAGACGGAGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAAGT 258377
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | |||||| || ||||| || || ||||| ||||| || || ||||||||||||||
Sbjct 258376 GCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCC 258317
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|| || |||||||||||| || ||| || || || || | || | || || |
Sbjct 258316 CTCTTTATCTTGAATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAA-CCTCCA 258258
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| ||||| || || |||||||||||||| |||||||| ||
Sbjct 258257 GCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTG 258218
Score = 104 bits (114), Expect = 2e-16
Identities = 117/154 (76%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| || || ||||| |||||||| ||||||||||| || || || ||||| || |||||
Sbjct 258598 ATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTT 258539
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735
|||||| |||||| ||||| || ||||| || | | | | || || ||| | | |
Sbjct 258538 GTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAG-TGA 258480
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||| || || ||||| ||||||||||| || ||
Sbjct 258479 TAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTG 258446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268175210778764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |