Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 118 1e-21 seq6 109 7e-19 >seq3 Length=2648250 Score = 118 bits (130), Expect = 1e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | |||||||| | | ||||| |||||||||| || | ||||| ||||||||| Sbjct 242924 TGGTATGCTATTCTGGAGGCTCAGACCGAGACTGGAAATCCTTTCATGCTGTACAAGGAT 242865 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || ||||||| ||||| ||||| ||||| ||||||| ||| ||||| || || || Sbjct 242864 GCCTGTAACAGAAAGAGCAACCAGAAGAACCTGGGAACGATCCGCAGCTCCAACCTCTGT 242805 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || ||||| | |||||||| | | ||||||| ||||| ||||| | || || | Sbjct 242804 ACTGAAATCATTGAGTACACTGCTCCGGATGAGGTTGCTGTCTGCAACCTTGCCTCTCTT 242745 Query 76058 GCCCTTCC 76065 ||||| || Sbjct 242744 GCCCTGCC 242737 Score = 89.7 bits (98), Expect = 6e-13 Identities = 205/307 (67%), Gaps = 9/307 (3%) Strand=Plus/Minus Query 75522 ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGG 75581 |||||||| |||| ||||| || || || ||| ||| || | |||||| | || | | Sbjct 243340 ATGGTATTGTTCCCATGCTCCGGGTGTTCAACAACACTGCCAGATATGTAGACCAGGGAG 243281 Query 75582 G------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCA 75635 | ||||| ||| | | | || | |||||||| || ||||| |||||| || Sbjct 243280 GAAACAAGCGTCC--AGGTG-CTTTTGCCATTTACTTGGAGCCTTGGCACGCCGATGTCT 243224 Query 75636 TGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCT 75695 | |||||||| || | || ||||| ||| | || || | | | ||||||| Sbjct 243223 TCGAGTTCCTCGATCTCCGCAAGAACCACGGTAAAGAGGAAGTGAGAGCCCGCGATCTCT 243164 Query 75696 TTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGT 75755 | | |||| |||| ||| ||| | ||||||||||| ||||| | || | ||| Sbjct 243163 TCTATGCCCTCTGGACTCCGGACTTGTTCATGAAGCGAGTTGAAGCCAACGGCGACTGGA 243104 Query 75756 CTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAG 75815 |||| |||||||| || |||| || || | |||| | ||||| || ||||| | Sbjct 243103 CTCTCTTCTGTCCTAACGAGGCCCCTGGCTTGGCCGATGTTTATGGTGACGAATTTGAGG 243044 Query 75816 CCCTCTA 75822 | ||||| Sbjct 243043 CACTCTA 243037 >seq6 Length=2060378 Score = 109 bits (120), Expect = 7e-19 Identities = 298/453 (66%), Gaps = 10/453 (2%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||||| |||| || | || || || ||| |||||||||||||||||||| || | Sbjct 1145857 CCTTCGGTCAGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCT 1145798 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 | | |||| | ||| |||||||||| || | ||||| || || ||||| || | Sbjct 1145797 TTGCCTCTATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACG 1145738 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248 | ||||| || || ||||||||||||||| || ||||| ||||||| | Sbjct 1145737 AGCTTATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACC 1145678 Query 65249 TGCGTAATAGACCCACTACCGAAACTAT---CCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 || || | ||| | | | | | ||| |||||| || || || | Sbjct 1145677 TGAACAACCGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTG---GAAGCTGTCTCCA 1145621 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365 ||||||| | |||| | ||||| || || || ||| | || |||||||| | Sbjct 1145620 TTGAGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACT 1145561 Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCAC 65425 ||||| | |||||||||||| || | || |||||||| || || || Sbjct 1145560 TGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTT--GGCAACAA 1145503 Query 65426 CCATT--TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAA 65483 | | | | || || | || ||||||||||| ||||| ||||| ||| | || || Sbjct 1145502 CAAGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAA 1145443 Query 65484 GACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 |||||||||||| |||||||| || || || || Sbjct 1145442 GACCAACTTCTTCGAGAAGCGTGTCGGTGATTA 1145410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568906487840