Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3 143 3e-29 seq6 136 4e-27 seq1 120 3e-22 >seq3 Length=2648250 Score = 143 bits (158), Expect = 3e-29 Identities = 594/927 (64%), Gaps = 24/927 (3%) Strand=Plus/Plus Query 148047 TTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGC 148106 |||| ||||||| |||||||||| | || || ||||| || ||||| | | || ||| Sbjct 241963 TTAAGCGACTGGGACTGGTCAATGTAGGCACCGCGGTCCGCAGCCATCTGCAAGA-TCGA 242021 Query 148107 TTTATCTTC-ATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTC 148165 | |||||||| | |||||||| || |||||||| |||| ||| Sbjct 242022 ACGCTGGGAGATCTCCCACACAGTCTTGTAGAGGGCCTTGATATCCGCGGGGATGTTAGG 242081 Query 148166 GATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAG 148225 |||| ||| || ||||| | | |||| || | || ||| | ||||| | || Sbjct 242082 GATGTTCTGGACGGAGCCACCCTCGGCAATGATACGGTTCTTCATGTTGTCCGACCACAG 242141 Query 148226 GTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAG 148285 || |||| || ||| | || || | | || || ||||| ||||| || || || Sbjct 242142 ACCAAGGTCGACCAAGTCCTTGAGAAGCCAAGGGTTGACGACCTGGAACTCACCCGCAAG 242201 Query 148286 CACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAAT 148345 || || || || | ||| || | || || || |||||||| |||||| || Sbjct 242202 GACACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGAT 242261 Query 148346 CTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATT 148405 ||| ||| |||| || |||||| ||| || |||| |||||||| |||| | Sbjct 242262 CTGACTGGTGCTTGCGGTCGGCATGGGCGCCACTAGCAAGCTGTTGCGCACACCGGTCTG 242321 Query 148406 TTTTATTTTGCGCTTC-AGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACA 148464 || || ||||| ||||| ||||||||||||| | || ||| || ||||| Sbjct 242322 GGCGATCTT-CGCTTTGAGAGCGTCCCAGTCCCAGAGATCAGTGGGGGTCCGGTCCCACA 242380 Query 148465 TGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT 148524 |||||||||| |||||||| || |||| ||| || || || ||||| |||| Sbjct 242381 TGTCGTACTGAAGAATGCCCTGGGAGACGGGAGAGCCTTCATATGACTCGTACGTTCCGA 242440 Query 148525 GCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTT 148584 || ||||| || | || | || |||| ||| || |||||| |||| Sbjct 242441 AGTCCTTGGCCAGGTCAGATGAAGCAGTCAAAGCTCCGTGGTAGATGGTCTCGAAGATTT 242500 Query 148585 GCCTGTTGAGCAGCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACG 148641 | |||| ||| || ||| |||| | ||| | |||| ||| || | || | Sbjct 242501 GGGTGTTTAGCTGCTTCGC---CTCGGGTGAGTCGAATGGCAAACGAAGGGCAAGGAAGG 242557 Query 148642 CGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCG 148701 | || || || || | || || | ||||||| ||||| |||||| | | | Sbjct 242558 CATCAGCCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTTGCTG-TTCTTG 242616 Query 148702 CGCTC-TCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACC 148760 ||| || || |||| ||| ||||||||||||| || || || |||| ||| Sbjct 242617 GCCTCAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGTACC 242676 Query 148761 TTTGTAATTCTGCGCAGCAATTCAAAATCGTACT---------TGTCATCTACGATGCAT 148811 | || | | | ||| |||| || || | |||| |||| | | Sbjct 242677 TGCACAACTTCGTGGAGCTTGCCAAAGTCATATTCACCGCGGGCAGCATCAACGAAG-GT 242735 Query 148812 CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCT 148871 || || ||| | |||||| || ||||| || || ||||||||| || ||||||| Sbjct 242736 GGG--CAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCA 242793 Query 148872 ACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTG 148931 | ||| || | || || ||| || |||| |||| |||||| || |||||||| Sbjct 242794 ATGATTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTT 242853 Query 148932 CTGTTGCACGCGTCCTTGTACAGCATG 148958 ||||| || || ||||||||||||||| Sbjct 242854 CTGTTACAGGCATCCTTGTACAGCATG 242880 >seq6 Length=2060378 Score = 136 bits (150), Expect = 4e-27 Identities = 343/517 (66%), Gaps = 11/517 (2%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || ||||| || || || ||| || ||||||| Sbjct 1145406 CTGGTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTC 1145465 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || || || |||||| | || || ||||| || | ||| | || || || Sbjct 1145466 CATGAAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCCAAGAGCGACCAGGAG 1145525 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || ||||||||||||| |||||| | | | ||||||||| || | || Sbjct 1145526 ACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGC 1145585 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || | || || | ||||||||||||||| || || ||| || | | | Sbjct 1145586 GCAAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTCCACGATAACGTC 1145645 Query 120591 GAGCATAGTGT---GGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647 || | | | || |||| |||| | | |||| | || |||||| || Sbjct 1145646 CTCCACAATCTGAGGGTCGGGGCGGTTGT-TCAGGTGCG-----AGAAGAGCAGGCAAGC 1145699 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 |||||| ||||| || ||||| || || || || ||||||||| || || || ||||| Sbjct 1145700 AAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGGG 1145759 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||| | ||| | |||| | |||| || | ||||||| || || ||||| | || Sbjct 1145760 CATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGATCCGGAGAAGAAGATACC 1145819 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-GTCGATCC 120826 ||| || ||| ||||| || | |||| | || |||| | || || | | ||||| Sbjct 1145820 CTCAACAGCGGCGAAGGCCACGAGACGCTGACCGAAGGTCGAC-TCCTGATCCTGGATCC 1145878 Query 120827 ACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 | || ||||| || ||||| || || | ||| || Sbjct 1145879 AGCGGATAGCCCAGTCAGCCTTCTTACGAATGCAAGG 1145915 >seq1 Length=3471301 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || ||||||||| || ||| | | | || |||||||||||||| Sbjct 258411 GTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCA-TCTTCGAGCTGCTTGCC 258353 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| ||||||||||| ||||| || || || || || |||||| ||| Sbjct 258352 GGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCTTGAATCTTTGACTT 258293 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||||| | || || || | || | || || ||||| ||||| Sbjct 258292 CACATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTTCCGGTGAGAGT 258233 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 258232 CTTGACGAAAATCTGCAT 258215 Score = 107 bits (118), Expect = 2e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || ||| | | | ||||| |||||||| || ||| | || Sbjct 909352 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCAAGCTGCTTACCGGCGAAGAT 909410 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || |||||||||||||| ||||| || |||||||| |||||| ||||| | || Sbjct 909411 CAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTC 909470 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| ||||||| ||| | ||| || || || || || || ||||| Sbjct 909471 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 909530 Query 133652 A 133652 | Sbjct 909531 A 909531 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || |||| |||| ||| ||||| |||||||| || | |||| | | | ||||| || Sbjct 258648 AAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCCA-TCCTCTAG 258590 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | || || || |||||||| || || || || |||||||| ||| Sbjct 258589 CTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGGAT 258530 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||||| | || | ||||| | | || || || | |||| || ||||| Sbjct 258529 CTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGTGATAGTCTTGCC 258470 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| |||||||| Sbjct 258469 AGTGAGCGTCTTAACGAAGATCTGCAT 258443 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||||||||| ||||| ||||||||||| Sbjct 257839 TCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTA 257780 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | |||||| | | ||| || || | |||| | Sbjct 257779 TCCTGAATCTTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATG 257720 Query 133626 GTTTTGCCGGT 133636 || |||||||| Sbjct 257719 GTCTTGCCGGT 257709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420238023320