Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05]
93 sequences; 36,974,910 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-17
>seq1
Length=3471301
Score = 104 bits (114), Expect = 2e-17
Identities = 104/133 (78%), Gaps = 4/133 (3%)
Strand=Plus/Minus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA- 134557
|||| || | ||| || || |||||||| |||||||||||||| | || | || ||
Sbjct 258201 CGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTC--CGACAGAGTACGAC 258144
Query 134558 -GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTT 134616
||| |||||||| || || || || |||||||||||||| ||||| || ||||||||||
Sbjct 258143 CGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCTTCTT 258084
Query 134617 TTTCTTGAATTTT 134629
| || || |||||
Sbjct 258083 TGTCCTGGATTTT 258071
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 134521 ATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAA 134580
|| |||| || ||||||||||||| | |||| | || || ||||| || || || |
Sbjct 909347 ATACCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGA 909406
Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640
| |||| ||||||||| ||||| || || || || || || || || || |||||
Sbjct 909407 AGATCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGT 909466
Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700
||| | |||||| ||| || |||||||| |||||||| ||||| || | || || |
Sbjct 909467 TGTCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGA 909526
Query 134701 CGAAA 134705
|||||
Sbjct 909527 CGAAA 909531
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||||||||| || ||||| ||||| || ||||||||||| || || |
Sbjct 1639251 AGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGG 1639310
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || |||| ||||||||| || || || || || ||
Sbjct 1639311 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCC 1639370
Query 134616 TTTTCT 134621
|| |||
Sbjct 1639371 TTGTCT 1639376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397812474360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |