Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq6 113 6e-20 seq3 109 7e-19 >seq6 Length=2060378 Score = 113 bits (124), Expect = 6e-20 Identities = 280/422 (66%), Gaps = 10/422 (2%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 || || ||||| |||||||| |||||||||||||| || | ||| ||||| ||||| Sbjct 1145410 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATG 1145469 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTGTTTGAGGAGAC 122488 ||||||||||| || | || || | | | | || || || ||||||| Sbjct 1145470 AAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCC--AAGAGCGACCAGGAGAC 1145527 Query 122489 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 122548 | || | || |||||||||||| | ||||| | |||||||| || | || | Sbjct 1145528 GGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCGC 1145587 Query 122549 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 122608 | || || ||||| | |||| | |||||||| || || || |||||| ||| Sbjct 1145588 AAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTC---CACGATAACGT 1145644 Query 122609 GG---ATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 122665 | | | | | ||| | || || | ||||||| ||||| | Sbjct 1145645 CCTCCACAATCTGAGGGTCGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAAGCAAAGT 1145704 Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725 | ||||||||||||||| || || ||||| || || ||||| ||||| ||||| | Sbjct 1145705 CAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCA 1145764 Query 122726 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 122785 || |||||||||| ||| | |||| | || || |||||||||||||||||||| | Sbjct 1145765 AGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGATCCGGAGAAGAAGATACCCTCAA 1145824 Query 122786 CA 122787 || Sbjct 1145825 CA 1145826 >seq3 Length=2648250 Score = 109 bits (120), Expect = 7e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||| | || || | ||||| ||||| ||||||| | | |||||||| | Sbjct 242737 GGCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATG 242796 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 ||||| ||||| | |||||| || ||||| |||| ||||| ||||| ||||| || Sbjct 242797 ATTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTG 242856 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || || ||||||||||| |||||| | || | || ||||| ||||| | | |||||| Sbjct 242857 TTACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATA 242916 Query 111410 GCCTTCCA 111417 || | ||| Sbjct 242917 GCATACCA 242924 Score = 84.2 bits (92), Expect = 3e-11 Identities = 203/307 (66%), Gaps = 9/307 (3%) Strand=Plus/Plus Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532 ||||| || ||||| || ||||| | |||| | || || |||| || |||||| Sbjct 243037 TAGAGTGCCTCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAG 243096 Query 111533 AAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592 || |||| ||| | || | ||||| ||||||||||| | ||| ||| |||| ||| Sbjct 243097 AAGAGAGTCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGG 243156 Query 111593 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652 | | |||||||| | | | || || | ||| ||||| || | || ||| Sbjct 243157 GCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGG 243216 Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC 111712 ||||| | || ||| |||||||| ||||| | || | || | || || | ||||| Sbjct 243217 AACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACC---TGGACGC 243273 Query 111713 ------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 111766 || | || | |||||| | || ||| ||| || || || ||||| |||| | Sbjct 243274 TTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACA 243333 Query 111767 ATACCAT 111773 ||||||| Sbjct 243334 ATACCAT 243340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031269912800