Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq6 158 1e-33 seq3 116 5e-21 >seq6 Length=2060378 Score = 158 bits (174), Expect = 1e-33 Identities = 312/459 (68%), Gaps = 22/459 (5%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || || ||||||||||||||||| ||||| ||| ||| | ||| || ||||| Sbjct 1145410 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATG 1145469 Query 129788 AAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGA 129842 || ||||||||||| | |||| | | ||| || |||| |||| Sbjct 1145470 AAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTG-----CCAAGAGCGACCAGGA 1145524 Query 129843 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902 |||| || | |||| |||||||||||| ||||| | ||||||||| || | || Sbjct 1145525 GACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAG 1145584 Query 129903 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGG 129962 || || || ||||| | |||| ||||||||||| ||||||||| ||||| Sbjct 1145585 CGCAAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTCC---ACGATAA 1145641 Query 129963 CGTGA---ATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---G 130016 ||| | ||| | | | || | ||| || | |||||| || | | Sbjct 1145642 CGTCCTCCACAATCTGAGGGTCGGGGCGGTTGTTCAGGTGCGAGAAGAG---CAGGCAAG 1145698 Query 130017 CAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 130076 |||| || |||||||||||| ||||| ||||| || || || ||||| ||||| | Sbjct 1145699 CAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGG 1145758 Query 130077 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 130136 |||| | || |||||||||| |||||| || | ||| || || ||||||||||| | Sbjct 1145759 GCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGATCCGGAGAAGAAGATAC 1145818 Query 130137 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 |||| ||| ||||| || | |||||||| | | |||| Sbjct 1145819 CCTCAACAGCGGCGAAGGCCACGAGACGCTGACCGAAGG 1145857 >seq3 Length=2648250 Score = 116 bits (128), Expect = 5e-21 Identities = 576/909 (63%), Gaps = 26/909 (3%) Strand=Plus/Plus Query 117998 GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 118057 ||| |||||||||||| |||||||| ||| ||||| | ||||| | ||| || || Sbjct 242031 GATCTCCCACACAGTCTTGTAGAGGGCCTTGATATCCGCGGGGATGTTAGGGATGTTCTG 242090 Query 118058 GATGGATCCACCCGCCTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAAT 118114 || ||| |||||| | | | |||| | | |||||| | | ||||| ||||||| Sbjct 242091 GACGGAGCCACCCTC---GGCAATGATACGGTTCTTCATGTTGTCCGACCACAGACCAAG 242147 Query 118115 CTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGT 118171 | | |||| |||| || | ||||| || ||||||||||| ||| Sbjct 242148 GTCGACCAAGTCCTT---GAGAAGCCAAGGGTTGACGACCTGGAACTCACCCGCAAGGAC 242204 Query 118172 GCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTG 118231 || | ||||| || | ||||| ||||| |||||||| ||| |||||||| || Sbjct 242205 ACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTG 242264 Query 118232 GGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCT 118291 ||| || || |||||||| |||| || | |||||| || | ||| | | Sbjct 242265 ACTGGTGCTTGCGGTCGGCATGGGCGCCACTAGCAAGCTGTTGCGCACACCGGTCTGGGC 242324 Query 118292 AATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TGCCACATAT 118350 || | ||||||||||||||||| || || | || || | |||||| | Sbjct 242325 GATCTTCGCTTTGAGAGCGTCCCAGTCCCAGA-GATCAGTGGGGGTCCGGTCCCACATGT 242383 Query 118351 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 118410 | |||| || || || ||||| | || || || ||| ||| ||| || | || Sbjct 242384 CGTACTGAAGAATGCCCTGGGAGACGGGAGAGCCTTCATATGACTCGTACGTTCCGAAGT 242443 Query 118411 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAG 118470 ||| |||| || || || | ||| |||| || || || || || || | | Sbjct 242444 CCTTGGCCAGGTCAGATGAAGCAGTCAAAGCTCCGTGGTAGATGGTCTCGAAGATTTGGG 242503 Query 118471 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCG 118530 || | ||| |||||| || || || | | || || || |||| | Sbjct 242504 TGTTTAGCTGCTTCGCCTCGGGTGAGTCGAATGGCAAACGAAGGGCAAGGAAGGCATCAG 242563 Query 118531 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT 118590 | ||||| | |||||| || |||| ||||| || | ||| || ||| || || Sbjct 242564 CCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTTGCTGTTCTTGGC---CT 242620 Query 118591 CC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 118647 | || || || |||| ||||||| | | | || || || | |||| Sbjct 242621 CAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGTACCTGCA 242680 Query 118648 TGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAG 118704 | ||| || ||||| | | ||| | || ||| | | ||| || | | | Sbjct 242681 CAACTTCGTGGAGCTTGCCAAAGTCATATTCACCGCGGGCAGCATCAACGA---AGGTGG 242737 Query 118705 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 118764 | ||||| | || || || || || |||| ||||||| | |||||||||| || | Sbjct 242738 GCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATGA 242797 Query 118765 TTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 118824 |||| || || | ||| || || || || |||| |||||| || || |||| ||| Sbjct 242798 TTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTGT 242857 Query 118825 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 118884 |||| ||||||||||| |||||| | || | || ||||| || || | || ||||||| Sbjct 242858 TACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATAG 242917 Query 118885 CCTTCCAGA 118893 | | ||||| Sbjct 242918 CATACCAGA 242926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434481069080