Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 165 9e-36 seq15 95.1 1e-14 >seq3 Length=2648250 Score = 165 bits (182), Expect = 9e-36 Identities = 355/524 (68%), Gaps = 10/524 (2%) Strand=Plus/Minus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACT---ACACGCGT 53236 |||||| | ||||| ||||| ||| | | ||||| || ||| | ||| | | | | Sbjct 243650 CCTCAGCACCTTTTGATGCGTGTCTCTGTTGGTATTCATGGTAATGACATTGAGAAGGCT 243591 Query 53237 GTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTG 53296 || ||||| || |||| ||| || ||||| || || || ||| |||| || || Sbjct 243590 ATC---GAGACCTATCACTTGATGTCTCAGAAGTATTTCACCCATGCCTCGCCGACTTTG 243534 Query 53297 TTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGAT 53356 ||||| |||||||| ||| |||||| | | ||||| || || | |||||||| Sbjct 243533 TTCAATGCTGGTACCCCTCAGCCTCAGCTTGCTTCATGCTTTCTTGTCGATATGAAGGAG 243474 Query 53357 GACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCG 53416 || ||||| || || || || ||||||||| ||||| ||||| ||| | Sbjct 243473 GATAGCATCGAAGGTATTTATGACACGCTCAAGACATGTGCATTGATCTCGAAGACCGCT 243414 Query 53417 GGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGAC 53475 ||||| |||||| || | ||| | | ||||||| | |||| | || || || Sbjct 243413 GGTGGAATCGGTCTCAATGTGCACCG-CATCCGTGCTACCGGCTCCTACATTGGTGGTAC 243355 Query 53476 GAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTA 53535 ||||| | || |||| || || || |||||||| || ||||||||||| ||| | || Sbjct 243354 CAACGGTTCCTCCAATGGTATTGTTCCCATGCTCCGGGTGTTCAACAACACTGCCAGATA 243295 Query 53536 CGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594 || ||||||| || ||||| | ||| | | || ||||| ||| | ||||| |||| Sbjct 243294 TGTAGACCAGGGAGGAAACAAGCGTCCAGGTG-CTTTTGCCATTTACTTGGAGCCTTGGC 243236 Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654 ||||||| | | ||||| ||||| || || ||| || ||| | || || || | Sbjct 243235 ACGCCGATGTCTTCGAGTTCCTCGATCTCCGCAAGAACCACGGTAAAGAGGAAGTGAGAG 243176 Query 53655 GCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 ||| || || || || || |||| ||||||| | |||||| Sbjct 243175 CCCGCGATCTCTTCTATGCCCTCTGGACTCCGGACTTGTTCATG 243132 >seq15 Length=1366461 Score = 95.1 bits (104), Expect = 1e-14 Identities = 210/306 (69%), Gaps = 8/306 (3%) Strand=Plus/Plus Query 152761 TGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATG 152820 || || | ||| | || ||| ||||||||||| || || ||| ||||| ||||||||| Sbjct 906126 TGCAAAAAGTTAATGAGCAAACCCTTGATGTGAGAACCATCATGATCCTGATCGGTCATG 906185 Query 152821 ATCATCAGACGACCGTAGCGCAGGTCACGTAGTGACCCGTAGA-CCTTTC-CATGTTGAA 152878 ||||||||| | || || ||||| |||| | | |||| | ||||| || || | Sbjct 906186 ATCATCAGATGTCCATAACGCAGCCCACG--GGTATCCGTGTATTCTTTCTTGTGCTGCA 906243 Query 152879 GCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGG 152938 ||| |||| ||||||| ||| | ||| | || | | | ||||| | |||| Sbjct 906244 ACCCAAGGAAGTTTTTGATGTTCTGGATTTCTGCGTTCTTCGAGATCTGTTCGAAAGTGG 906303 Query 152939 CATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGG-CCT 152997 |||| || || || || ||||||| ||||| || || || || || | | | ||| || Sbjct 906304 CATCACGGACGTTCAGCAGCTTTCCTCGGAGGGGGAAAACACC-AAAGAGATCCGGACCG 906362 Query 152998 A-CAACGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAG 153056 | || ||| | | || || || || || | || || |||||||| || || | ||| || Sbjct 906363 ACCACCGCAC-GTCCAGCCATGGCCAGACCCTTGGCGGAGTCACCTTCTGTCAGAATCAG 906421 Query 153057 CGTACA 153062 || || Sbjct 906422 TGTGCA 906427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215363861400