Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05]
93 sequences; 36,974,910 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 3e-19
>seq1
Length=3471301
Score = 109 bits (120), Expect = 3e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| ||||| || | ||||||||||| ||||| || || ||||| || || ||
Sbjct 258660 AGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGTGCGT 258601
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || || || ||||| || | ||| || ||||| || || | ||||||
Sbjct 258600 CCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCC 258541
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||| |||| || ||| | || ||||| ||| || ||||||| ||
Sbjct 258540 TTGTCTTGGATC-TTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGT 258482
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | ||| || || || ||||||||
Sbjct 258481 GATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 258443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729243273669
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |