Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq20 105 6e-18 >seq20 Length=328506 Score = 105 bits (116), Expect = 6e-18 Identities = 334/516 (65%), Gaps = 29/516 (6%) Strand=Plus/Plus Query 34309 GCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAA 34368 |||||| || || || ||||||||||||| |||| || || || || ||||| Sbjct 158688 GCTCTCCGACCAAGGCGTCAAGATCTGGGACGGCAACGGCAGCCGTGAGTTCCTCGACAA 158747 Query 34369 GCGGGGGTTC--CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGG 34426 | || | ||| | || ||| ||||| |||| || || ||||||||||| ||| Sbjct 158748 GGTCGGCCTGGACCACCGCG--AGGTCGGCGATCTGGGTCCCGTGTACGGGTTCCAATGG 158805 Query 34427 AGACACTTTGGGGCGGAGTATCGGGGGAG-CGAAGCGGACTATTCGGGACAGGGAGCGGA 34485 | ||||| ||||| ||||| || | | | || | ||||| ||||||| || | || Sbjct 158806 CGCCACTTCGGGGCCGAGTA-CGTCGACGCCAAAACCGACTACACGGGACAAGGCGTTGA 158864 Query 34486 CCAGCT-GCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGA 34544 |||||| || | | || | ||| ||||| ||||| ||| | | ||| | | Sbjct 158865 CCAGCTCGCCG-AGGTCGTGCACAAGCTGAAGAATAACCCCTTCGACCGCCGCATCATCA 158923 Query 34545 TGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCT 34604 || |||| |||||||| |||||| |||||| ||||| || || || | || Sbjct 158924 TGAGCGCCTGGAACCCCGCCGATCTCAAGAAGATGGCCCTCCCGCCTTGTCATATGTTCG 158983 Query 34605 GCCAATTCTACGTCGC---------------------GAATGGGGAGCTGTCCTGCCAGC 34643 ||| ||||||||| | ||| || | || |||||||| Sbjct 158984 CCCAGTTCTACGTCTCCTACCCCAATGGCCAAGACCAGAAGGGTCATCTCCACTGCCAGC 159043 Query 34644 TCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTC 34703 |||| || || ||| | ||| | | | || ||||||||||| ||||| ||||| | Sbjct 159044 TCTACCAGCGCTCGTGTGACGTCGCCCTCGGCGTGCCGTTCAATATTGCCTCCTACGCCC 159103 Query 34704 TGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGT 34763 | | || | ||||| ||||||| |||| || ||| || | || ||| | Sbjct 159104 TCTTGACCCATATGATTGCTCATGCTGTGGACCTGCATCCCGGTACCTTTGTTCATGCCA 159163 Query 34764 TGGGGGATGCGCATATCTACCTGAACCACATCGAGC 34799 |||| ||| | ||| |||||||| |||| |||||| Sbjct 159164 TGGGTGATACTCATGTCTACCTGGACCATGTCGAGC 159199 Score = 105 bits (116), Expect = 6e-18 Identities = 334/516 (65%), Gaps = 29/516 (6%) Strand=Plus/Minus Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAA 6605 |||||| |||| |||||||| ||| | ||| |||| | ||| || | || ||| Sbjct 159199 GCTCGACATGGTCCAGGTAGACATGAGTATCACCCATGGCATGAACAAAGGTACCGGGAT 159140 Query 6606 CCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACG 6665 || |||| ||||||| ||||| | || | || ||||| ||||| ||||||| Sbjct 159139 GCAGGTCCACAGCATGAGCAATCATATGGGTCAAGAGGGCGTAGGAGGCAATATTGAACG 159080 Query 6666 GCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTC- 6724 |||| || | | | ||| | ||| || || |||||||||||| || | || ||| Sbjct 159079 GCACGCCGAGGGCGACGTCACACGAGCGCTGGTAGAGCTGGCAGTGGAGATGACCCTTCT 159020 Query 6725 --------------------GCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCG 6764 | ||||||||| ||| || | || || || ||||| | Sbjct 159019 GGTCTTGGCCATTGGGGTAGGAGACGTAGAACTGGGCGAACATATGACAAGGCGGGAGGG 158960 Query 6765 CCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGT 6824 ||||| |||||| |||||||| |||| ||| | ||| | | ||| |||| Sbjct 158959 CCATCTTCTTGAGATCGGCGGGGTTCCAGGCGCTCATGATGATGCGGCGGTCGAAGGGGT 158900 Query 6825 TCCGCTTCAAGGTGTCGATCACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCC 6883 | ||||| ||| | || | | || |||||||| | || ||||||| ||||| Sbjct 158899 TATTCTTCAGCTTGTGCACGACCT-CGGCGAGCTGGTCAACGCCTTGTCCCGTGTAGTCG 158841 Query 6884 GCTTCG-CTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCC 6942 | || | | | || ||||| ||||| ||||| | ||| ||||||||||| || || || Sbjct 158840 GTTTTGGCGTCGACG-TACTCGGCCCCGAAGTGGCGCCATTGGAACCCGTACACGGGACC 158782 Query 6943 CAAGTCGCCCTCCTCCCGAGATGG--GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCG 7000 || ||||| ||| || | ||| | || |||||| || || || || ||| Sbjct 158781 CAGATCGCCGACCT--CGCGGTGGTCCAGGCCGACCTTGTCGAGGAACTCACGGCTGCCG 158724 Query 7001 TGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGC 7036 | ||||||||||||| || || || |||||| Sbjct 158723 TTGCCGTCCCAGATCTTGACGCCTTGGTCGGAGAGC 158688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261878894960