Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1 170 4e-37 >seq1 Length=3471301 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| | ||| | || |||||||| |||||||| ||||| | | || Sbjct 258436 ACGAAGACGGAGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAAGT 258377 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| ||||||||||| ||||| || || || || ||||||||||||| ||| Sbjct 258376 GCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCC 258317 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || || || || |||||| ||||| || ||||| ||||| || ||||||||| || Sbjct 258316 CTCTTTATCTTGAATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAACCTCCAG 258257 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| ||||||||||| || || | |||||| Sbjct 258256 CGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 258215 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| | ||| ||| || || || || || || | || || | |||||| Sbjct 258654 AGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCCATCC 258595 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || |||||||| ||||| ||||| || |||| || |||||||| Sbjct 258594 TCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTCT 258535 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| ||||| ||||| ||||||||||| || | |||||| ||| Sbjct 258534 TGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGTGATAGTC 258475 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 258474 TTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 258443 Score = 152 bits (168), Expect = 1e-31 Identities = 149/191 (78%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || |||||||| || ||||||||||| || | ||||| | ||||| Sbjct 257896 AGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATCC 257837 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||||||||||| |||||||| ||| Sbjct 257836 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 257777 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 || ||||| || ||||| ||||| ||||| ||| || ||||| | |||||| Sbjct 257776 TGAATCTTGCTCTTGACGTTGTCGATAGTGTC---GCTCGACTCGACCTCCAAAGTGATG 257720 Query 211080 GTCTTTCCCGT 211090 ||||| || || Sbjct 257719 GTCTTGCCGGT 257709 Score = 129 bits (142), Expect = 1e-24 Identities = 151/203 (74%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||| || || || || ||||| || |||| || || | || || Sbjct 258198 AGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTACGACCGTCC 258139 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || || ||||| || |||| ||||| |||||| Sbjct 258138 TCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCTTCTTTGTCC 258079 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 ||||| || || ||||| |||||||| || |||| |||||||| || ||||| Sbjct 258078 TGGATTTTGCTCTTAACGTTGTCGATGGTATC---GCTTGACTCAACCTCAAGGGTGATA 258022 Query 211080 GTCTTTCCCGTGAGAGTCTTTAC 211102 |||||||| ||||| ||||| || Sbjct 258021 GTCTTTCCAGTGAGGGTCTTCAC 257999 Score = 122 bits (134), Expect = 2e-22 Identities = 137/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || |||||||| || |||||||| Sbjct 909352 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 909411 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| || || | || ||||||||||||||||| || ||||| ||| Sbjct 909412 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 909471 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| ||||| ||||| || || ||||| |||||||| ||||| || Sbjct 909472 ATGGTGTC---GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 909528 Query 211104 AA 211105 || Sbjct 909529 AA 909530 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| |||||||| || |||||||| || || | ||| || | || || Sbjct 1639257 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCC 1639316 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| || || || |||||||| || | ||| |||||||| Sbjct 1639317 TCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTC 1639375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150618797945