Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq20 105 5e-18 >seq20 Length=328506 Score = 105 bits (116), Expect = 5e-18 Identities = 400/632 (63%), Gaps = 29/632 (5%) Strand=Plus/Minus Query 29622 TGGGCTCCCTCTCGAGCTGAATCCT-CAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCA 29680 ||||||||||| | ||||| |||| || || || || ||||| |||||||| |||| | Sbjct 159229 TGGGCTCCCTCACCAGCTGC-TCCTGCAAGGGCTCGACATGGTCCAGGTAGACATGAGTA 159171 Query 29681 TCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTAC 29740 || |||| || || ||||| || || | || | | ||||| ||||| | Sbjct 159170 TCACCCATGGCATGAACAAAGGTACCGGGATGCAGGTCCACAGCATGAGCAATCATATGG 159111 Query 29741 GTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTC 29800 || | ||| | |||| ||| || || || ||||| ||||| | | ||| | || | | Sbjct 159110 GTCAAGAGGGCGTAGGAGGCAATATTGAACGGCACGCCGAGGGCGACGTCACACGAGCGC 159051 Query 29801 TGGTAGAGCTGGCAC--GAGA----------GCTCT---CC------GTCGCTCACGTAA 29839 |||||||||||||| |||| | ||| || || | ||||| Sbjct 159050 TGGTAGAGCTGGCAGTGGAGATGACCCTTCTGGTCTTGGCCATTGGGGTAGGAGACGTAG 158991 Query 29840 AACTGAC---ACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTC 29896 ||||| |||| ||| || || || |||||||| | || ||||||| Sbjct 158990 AACTGGGCGAACAT---ATGACAAGGCGGGAGGGCCATCTTCTTGAGATCGGCGGGGTTC 158934 Query 29897 CAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTT 29956 ||||| | || ||||||||| | ||| ||||| ||| | | || |||| | | Sbjct 158933 CAGGCGCTCATGATGATGCGGCGGTCGAAGGGGTTATTCTTCAGCTTGTGCACGACCTCG 158874 Query 29957 TGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCG 30016 ||||| || || || |||| |||||| | || Sbjct 158873 GCGAGCTGGTCAACGCCTTGTCCCGTGTAGTCGGTTTTGGCGTCGACGTACTCGGCCCCG 158814 Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || || | ||| |||||||||||||| || ||||| || || | || | ||| || | | Sbjct 158813 AAGTGGCGCCATTGGAACCCGTACACGGGACCCAGATCGCCGACCTCGCGGTGGTCCAGG 158754 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || |||||| | || || | | |||||| ||||||||||||| || || | ||| Sbjct 158753 CCGACCTTGTCGAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACGCCTTGGTCG 158694 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 |||||| ||| ||| | || || |||||| ||||| || | |||||||| Sbjct 158693 GAGAGCGGCAGGGATGAGGTGCAGCCGGAGATGAACCAGAGCAGTTCGGCGACGACGGCG 158634 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 ||||| | |||||| || |||||||| Sbjct 158633 CGGAGGAAGACGCGCTTGGTGGTCAGGAGGGG 158602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162739639398