Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq20 132 4e-26 >seq20 Length=328506 Score = 132 bits (146), Expect = 4e-26 Identities = 410/633 (65%), Gaps = 31/633 (5%) Strand=Plus/Minus Query 27116 TGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGT 27175 ||||||||||| | ||||| || || || || || || ||||||||||| |||| | Sbjct 159229 TGGGCTCCCTCACCAGCTGCTCCTGCAAGGGCTCGACATGGTCCAGGTAGACATGAGTAT 159170 Query 27176 CTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACG 27235 | |||| || || ||||| || || | || | | ||||| ||||| | | Sbjct 159169 CACCCATGGCATGAACAAAGGTACCGGGATGCAGGTCCACAGCATGAGCAATCATATGGG 159110 Query 27236 TGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCT 27295 | | ||| | |||| ||| || || || || || ||||| | | ||| | ||| | || Sbjct 159109 TCAAGAGGGCGTAGGAGGCAATATTGAACGGCACGCCGAGGGCGACGTCACACGAGCGCT 159050 Query 27296 GGTAGAGCTGACAC--GAGA----------GCTCT---CCATCGCTT------ACGTAAA 27334 |||||||||| || |||| | ||| |||| | ||||| | Sbjct 159049 GGTAGAGCTGGCAGTGGAGATGACCCTTCTGGTCTTGGCCATTGGGGTAGGAGACGTAGA 158990 Query 27335 ACTG-----ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTT 27389 |||| ||||||| | ||| ||||| ||||| | || |||||| Sbjct 158989 ACTGGGCGAACATATGACAAGGCG-GGAGG----GCCATCTTCTTGAGATCGGCGGGGTT 158935 Query 27390 CCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTT 27449 |||||||| || ||||||||| | ||| ||||| ||| | | || |||| | | Sbjct 158934 CCAGGCGCTCATGATGATGCGGCGGTCGAAGGGGTTATTCTTCAGCTTGTGCACGACCTC 158875 Query 27450 TTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCC 27509 ||||| || || || |||| |||||| | ||| |||||| || || Sbjct 158874 GGCGAGCTGGTCAACGCCTTGTCCCGTGTAGTCGGTTTTGGCGTCGACGTACTCGGCCCC 158815 Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 27569 ||| || | |||||||||||||||||| || ||||| || || | || | ||| || | Sbjct 158814 GAAGTGGCGCCATTGGAACCCGTACACGGGACCCAGATCGCCGACCTCGCGGTGGTCCAG 158755 Query 27570 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 27629 ||| |||||| | || || | | |||||| ||||||||||||| || || | || Sbjct 158754 GCCGACCTTGTCGAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACGCCTTGGTC 158695 Query 27630 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 27689 ||||||| ||| ||| | || || |||||| ||||| || | |||||||| Sbjct 158694 GGAGAGCGGCAGGGATGAGGTGCAGCCGGAGATGAACCAGAGCAGTTCGGCGACGACGGC 158635 Query 27690 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 ||||| | |||||| || |||||||| Sbjct 158634 GCGGAGGAAGACGCGCTTGGTGGTCAGGAGGGG 158602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506781186683