Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 >seq1 Length=3471301 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || |||||||||||||||| | ||| | || || |||||||| ||||| || Sbjct 258406 CTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 258347 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 || | ||||||||| || | ||| | || || || || ||||| ||||| | Sbjct 258346 AATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCTTGAATCTTTGACTTCACATT 258287 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||||| ||||| ||||||| |||||| |||||||| ||||| ||||| || Sbjct 258286 ATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGAC 258227 Query 44326 GAAGATTTGCAT 44337 ||| || ||||| Sbjct 258226 GAAAATCTGCAT 258215 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| | ||||||||||| || || ||||| || | ||| ||| | || || Sbjct 258651 ACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCCATCCTCT 258592 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | ||| ||||| |||| || | ||| ||||| || Sbjct 258591 AGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGG 258532 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | | ||| || |||| || || ||||| Sbjct 258531 ATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGTGATAGTCTTG 258472 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||| ||||| Sbjct 258471 CCAGTGAGCGTCTTAACGAAGATCTGCAT 258443 Score = 105 bits (116), Expect = 5e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| ||| || ||| | || || |||||||| ||||| |||| Sbjct 909350 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 909409 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 ||| ||||||||| || | || | ||| ||||| ||| ||||| ||| | | Sbjct 909410 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 909469 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | ||||||||| || || || || | ||||| ||||| |||||||||||||| |||| Sbjct 909470 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 909529 Query 44328 A 44328 | Sbjct 909530 A 909530 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || ||||| || |||||||| || | || || |||| || Sbjct 258195 ACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTACGACCGTCCTCG 258136 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||||||||||||| || | || | ||||| || ||| Sbjct 258135 AGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCTTCTTTGTCCTGG 258076 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 || || ||| || ||| | ||||| ||| || || ||||| | || || ||||| Sbjct 258075 ATTTTGCTCTT-AACGTTGTCGATGGTATCGCTTGACTCAACCTCAAGGGTGATAGTCTT 258017 Query 44308 TCCCGTGAGGGTCTTCACGA 44327 ||| |||||||||||||||| Sbjct 258016 TCCAGTGAGGGTCTTCACGA 257997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989991973381