Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20parasiticus_20[genbank_20GCA_5F001576805.1_202016-02- 26] 998 sequences; 30,136,366 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq697 129 5e-25 seq24 100 2e-16 seq528 82.4 7e-11 >seq697 Length=12154 Score = 129 bits (142), Expect = 5e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | |||||||||||| || |||||||||||| || ||||| ||| ||| Sbjct 6683 ACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAGGTGCGACCATCTTCG 6624 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || ||| | |||||||||||||| || || || || ||||| || ||| | Sbjct 6623 AGTTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGGGGAATTCCCTCTTTATCTTGA 6564 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| || || | |||| ||||| | || | || ||||| | || | || || Sbjct 6563 GTTTTTGACTTCACATTATCGATCGTGTCGGATGAT-TCAACCTCCAGTGTAATTGTCTT 6505 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| || || ||||||||||| Sbjct 6504 TCCGGTGAGAGTCTTGACGAAAATCTGCAT 6475 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| ||||| || || || |||||||| || || ||| || |||||| Sbjct 6455 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCCGACAGAGTACGGCCGTCCTCG 6396 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| |||| | ||||||||| |||||||| ||||| ||||||||| Sbjct 6395 AGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGG 6336 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||||| | |||| ||| || | ||| ||||| | ||| | || || Sbjct 6335 ATCTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAACCTCAAGGGTGATAGTCTTT 6276 Query 118710 CCGGTCAGAGTTTTTAC 118726 || || || || || || Sbjct 6275 CCAGTGAGGGTCTTCAC 6259 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCT 118587 |||||||| | || ||| || || || ||||| || | | || | |||| ||||| Sbjct 6911 ACCAAGTGTAAGGTGCTCTCCTTCTGGATATTGTAGTC--TGAGAGCGTGCGTCCATCCT 6854 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | ||||| || ||||| ||| ||||| ||||| || || || || |||||||||||| Sbjct 6853 CTAGCTGCTTACCAGCAACGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTCTT 6794 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || ||| | || | |||| ||||||| |||||| || || | || | || | Sbjct 6793 GGATCTTTGACATGACGTTATCGATAGTGTCCGAGCTCTCAACTTCCAAAGTGATAGTCT 6734 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || || || |||||||| Sbjct 6733 TGCCAGTAAGCGTCTTAACGAAGATCTGCAT 6703 >seq24 Length=106521 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||| ||||| || || ||| |||| Sbjct 88976 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 89035 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 ||||||||||| ||||| || |||||||||||||| || || || || | ||| Sbjct 89036 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 89095 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | |||||| | ||| || |||| ||| | || || || || || || || || ||| Sbjct 89096 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAAA 89155 >seq528 Length=19846 Score = 82.4 bits (90), Expect = 7e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| || | ||| || ||||| Sbjct 4142 CACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCCTC 4201 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 |||||| || |||||| |||| ||||||||||| || || || || |||||||||||| Sbjct 4202 GAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCT 4259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433825123266616