Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20parasiticus_20[genbank_20GCA_5F001576805.1_202016-02- 26] 998 sequences; 30,136,366 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq24 105 8e-18 seq697 104 3e-17 >seq24 Length=106521 Score = 105 bits (116), Expect = 8e-18 Identities = 134/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || ||||||||||| ||||| | Sbjct 88974 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 89033 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||||| || | || |||||||||| ||| || |||| ||| | Sbjct 89034 TCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 89092 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 89093 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 89152 Query 43173 AA 43174 || Sbjct 89153 AA 89154 >seq697 Length=12154 Score = 104 bits (114), Expect = 3e-17 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || || ||||||||||| || |||||||| || | || || || | Sbjct 6918 ACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGGATATTGTAGTCTGAGAGCGTGCGTCC 6859 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || ||||||||||||||||| | || || || |||||||| | || | | |||||| Sbjct 6858 ATCCTCTAGCTGCTTACCAGCAACGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTT 6799 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 ||| ||| ||| ||| | | | ||||| |||| || || || | || Sbjct 6798 GTCTTGGATCTTTGACATGACGTTATCGATAGTGTCCGAGCTC---TCAACTTCCAAAGT 6742 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || ||||| || |||||||| || ||||| ||||| Sbjct 6741 GATAGTCTTGCCAGTAAGCGTCTTAACGAAGATCTGCAT 6703 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || | |||||| || |||| || ||||||||||||||||| Sbjct 6437 TCCTTCTGGATGTTGTAGTCCGACAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAG 6378 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | ||||||||||||| || | || ||||||| | || | || | | | ||| Sbjct 6377 ATCAAACGCTGCTGGTCGGGAGGAATGCCTTCCTTGT-CTTGGATCTTGCTCTTAACGTT 6319 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | || ||||| || || || || | ||||| || || || || || ||||| || Sbjct 6318 GTCGATGGTATCGCTTGACTCAACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 6259 Score = 84.2 bits (92), Expect = 3e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| |||||||| ||| || || || |||||||| | || || || | || || Sbjct 6683 ACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAGGTGCGACCATCTTCG 6624 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 || ||||| || ||||| ||||| ||||||||||| | || | | ||| || | | || Sbjct 6623 AGTTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGGGGAATTCCCTCTTTAT-CTTG 6565 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 | |||||| || | | | | ||||||| ||||| || || | || || || || Sbjct 6564 AGTTTTTGACTTCACATTATCGATCGTGTCGGATGATTCAACCTCCAGTGTAATTGTCTT 6505 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || ||||| || || || ||||| Sbjct 6504 TCCGGTGAGAGTCTTGACGAAAATCTGCAT 6475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571810466575440