Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20parasiticus_20[genbank_20GCA_5F001576805.1_202016-02- 26] 998 sequences; 30,136,366 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq164 122 2e-22 >seq164 Length=53041 Score = 122 bits (134), Expect = 2e-22 Identities = 461/713 (65%), Gaps = 19/713 (3%) Strand=Plus/Minus Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 || |||| |||| | ||||| ||||| | || || | ||||| || || ||| Sbjct 33096 GCTATTGTGTACGACCGCGATTTCAAGTACAACTTTTTCGGCTTCAAGACTCTCGAGCGG 33037 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 || || | || ||||||| ||| | | ||||| ||||||| | |||||||| Sbjct 33036 TCATACTTGCTGCGGGTTGATGGAAAGGTTGCTGAACGTCCTCAGCACCTTTTGATGCGT 32977 Query 248911 GTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTA-CACCGGAAT 248969 || |||| || ||||| ||||||| |||| | ||||||| || ||| || | Sbjct 32976 GTCTCTGTTGGTATTCATGGTAATGACATTGAGAAGGCTATCGAGACCTATCACTTGA-T 32918 Query 248970 GAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCG-TCAACA 249028 | | | | | || |||||| ||||| | ||||| || |||||| ||| Sbjct 32917 GTCTCAGAAGTATTTCACCCATGCCTATCCGACTTTGTTCAATGCGGGTACCCCTCAGSC 32858 Query 249029 ATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATG 249088 |||||| || ||||| ||| | | ||| | || || |||| |||||||||| Sbjct 32857 -TCAGCTTGCTTCATGCTTCCTTGTCGATATGAAGGAGGATAGCATCGAAGGCATTTATG 32799 Query 249089 ACACGCTTAAACAGACG-GCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTC 249147 ||| ||| || | | | || ||| || || ||| || |||||||| ||| ||| Sbjct 32798 ACAGGCTCAAG-ACATGTGCATTGATCTCGAAGACCGCTGGTGGAATCGGCCTCAACGTG 32740 Query 249148 TCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATC 249207 | |||||| || | ||||| ||||| ||||| || || | ||||||| Sbjct 32739 CACCGCATCCGTGCTACCGGTTCCTACATTGGTGGTACCAACGGTTCCTCCAATGGTATT 32680 Query 249208 GTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGG------G 249261 || || | || || || | ||| ||||| | | |||||| || | Sbjct 32679 GTTCCTATGCTCCGGGTGTTCAACAACACTGCCAGATATGTAGACCAGGGAGGCAACAAG 32620 Query 249262 CGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTC 249321 || | | || | || ||||| || ||||| |||||||||||| | || |||||| Sbjct 32619 CGTCCA---GGTGCTTTTGCCATTTACTTGGAGCCTTGGCACGCCGATGTCTTCGAGTTC 32563 Query 249322 CTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGC 249381 ||||| | |||||| |||| || ||| ||||||| || || |||||||| | | Sbjct 32562 CTGGATCTCCGCAAGAACCACGGTAAGGAGGAAGTGAGAGCCCGCGATCTCTTCTATGCC 32503 Query 249382 CTGTGGGTCTCCG-ACTTGTTCATGCGCCGCGT--CAAGGCCGACGGCGATTGGACGCTT 249438 || ||| ||||| ||||||||||| || || | ||| ||||||| ||||| || Sbjct 32502 CTCTGGA-CTCCGGACTTGTTCATGAAACGAGTTGNNAAGCCAACGGCGAGTGGACTCTC 32444 Query 249439 CTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTACACGGCGCCGACTTCGA 249491 | | ||| ||| ||||| | | | |||| | | || | ||| ||||| Sbjct 32443 TTCTGTCCTAACGAGGCCCCTGGCTTGGCCGATGTTTATGGTGACGAATTCGA 32391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073752669883264