Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20parasiticus_20[genbank_20GCA_5F001576805.1_202016-02- 26] 998 sequences; 30,136,366 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq164 187 3e-42 >seq164 Length=53041 Score = 187 bits (206), Expect = 3e-42 Identities = 593/911 (65%), Gaps = 16/911 (2%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 ||||| ||||| || |||||| | |||| | ||| || | ||||| | | | | Sbjct 32391 TCGAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 32450 Query 63249 CACTCTCCGTCATCCTTC--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA- 63305 ||||| |||| | | ||||||||||| || | || ||| |||| || || ||| Sbjct 32451 CACTCGCCGTTGGCTTNNCAACTCGTTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAG 32509 Query 63306 AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63365 || ||||| | | ||| |||||| || || ||||| ||||| |||||| | Sbjct 32510 AAGAGATCGCGGGCTCTCACTTCCTCCTTACCGTGGTTCTTGCGGAGATCCAGGAACTCG 32569 Query 63366 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63425 | | ||| | ||||| || |||||||| ||||| | | | || || || ||||| ||| Sbjct 32570 AAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTGCCT 32629 Query 63426 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63485 ||||| |||| ||||| || ||||| || | || | | ||| |||| |||||| || Sbjct 32630 CCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATAGGAACAATACCATTG 32689 Query 63486 GATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATA 63543 || ||| |||||||| || ||| || | ||||| || | | ||| | Sbjct 32690 GAGGAACCGTTGGTACCACCAATGTAGGAACCGGTAGCACGGATGCGGTGCACGTTG--A 32747 Query 63544 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGC 63603 | || ||||| || || | || ||||| ||||| ||| || | | ||||||| |||| Sbjct 32748 GGCCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCCTGTCATAAATGC 32807 Query 63604 CTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAG 63663 |||| |||||||| || |||| | | || || || || | || ||| | Sbjct 32808 CTTCGATGCTATCCTCCTTCATATCGACAAGGAAGCATGAAGCAAGCTGAGSCTGAGGGG 32867 Query 63664 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT 63723 | |||||||| || || || ||| | || || || || | || | ||| | | | | Sbjct 32868 TACCCGCATTGAACAAAGTCGGATAGGCATGGGTGAAATACTTCTGAGACATCAAGTGAT 32927 Query 63724 ACGTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAA 63781 | ||||| ||||| ||| || |||| |||||| || || | ||||||||| || Sbjct 32928 AGGTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAA 32985 Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841 | ||||||||| | |||| ||| || | | || |||||| || || | Sbjct 32986 AAGGTGCTGAGGACGTTCAGCAACCTTTCCATCAACCCGCAGCAAGTATGACCGCTCGAG 33045 Query 63842 AGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTG 63899 ||| || || || ||| ||||||| ||||| || || ||||| | |||| | || ||| Sbjct 33046 AGTCTTGAAGCCGAAAAAGTTGTACTTGAAA--TCGCGGTCGTACACAATAGCTGAGTTG 33103 Query 63900 AGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGT 63959 || | || || ||| | ||||| || || |||| || || || | | | Sbjct 33104 AGTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGC 33163 Query 63960 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 64019 ||| ||| || || || || || | | ||| || || || ||| | || Sbjct 33164 TTCTTATTCTTTGGGTTGACGTAATGGTATAGGTCTGAAATAACGAGGGAGAATTGCTTC 33223 Query 64020 tttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGA 64079 ||||| | | |||| || ||||| | ||||| | || || |||||||| || | ||| Sbjct 33224 TTTGTCTGCCTGTGAAGGTTTGAAACAGCTATACGAGCAGCAAGAATGGCGTAGCCTGGA 33283 Query 64080 TGTTGTGTAGT 64090 ||| ||||| Sbjct 33284 TGTGTGGTAGT 33294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629809743025440