Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20parasiticus_20[genbank_20GCA_5F001576805.1_202016-02- 26] 998 sequences; 30,136,366 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq164 201 2e-46 seq512 87.8 2e-12 >seq164 Length=53041 Score = 201 bits (222), Expect = 2e-46 Identities = 596/911 (65%), Gaps = 16/911 (2%) Strand=Plus/Plus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 ||||| ||||| || || ||| | | || ||||| || || ||||| | | | | Sbjct 32391 TCGAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 32450 Query 72004 CACTCTCCATCATCATTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA- 72060 ||||| || | | | ||||||||||| || | || ||| |||| || || ||| Sbjct 32451 CACTCGCCGTTGGCTTNNCAACTCGTTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAG 32509 Query 72061 AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 72120 || ||||| | || ||| ||||| || || ||||| ||||| |||||| | Sbjct 32510 AAGAGATCGCGGGCTCTCACTTCCTCCTTACCGTGGTTCTTGCGGAGATCCAGGAACTCG 32569 Query 72121 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCT 72180 | | ||| | ||||| || |||||||| ||||| | | | || || || ||||| ||| Sbjct 32570 AAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTGCCT 32629 Query 72181 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 72240 ||||| |||| ||||| || ||||| || | || | | ||| |||| |||||||||| Sbjct 32630 CCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATAGGAACAATACCATTG 32689 Query 72241 GATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATA 72298 || | ||| ||||| || || ||| || | ||||| || ||| ||| | Sbjct 32690 GAGGAACCGTTGGTACCACCAATGTAGGAACCGGTAGCACGGATGCGGTGCACGTTG--A 32747 Query 72299 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 72358 | || ||||| || || | || ||||| ||||| ||| || | | | ||||| |||| Sbjct 32748 GGCCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCCTGTCATAAATGC 32807 Query 72359 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 72418 | || || ||||| ||| |||| | | || || || || | || || | Sbjct 32808 CTTCGATGCTATCCTCCTTCATATCGACAAGGAAGCATGAAGCAAGCTGAGSCTGAGGGG 32867 Query 72419 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT 72478 | |||||||| || || || ||| | || || || || | || | ||||| | | | Sbjct 32868 TACCCGCATTGAACAAAGTCGGATAGGCATGGGTGAAATACTTCTGAGACATCAAGTGAT 32927 Query 72479 ACGTCTCAATAGCTGATTCTATATCCCATT--GATGTATTCCTACCGCGACACGCATTAA 72536 | ||||| ||||| |||| || |||| ||| || || || | ||||||||| || Sbjct 32928 AGGTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAA 32985 Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAA 72596 | |||||||| | |||| | | ||| || | || |||||| || || | Sbjct 32986 AAGGTGCTGAGGACGTTCAGCAACCTTTCCATCAACCCGCAGCAAGTATGACCGCTCGAG 33045 Query 72597 AGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTG 72654 ||| || || || ||| ||||||| ||||| || || ||||| | |||| | || ||| Sbjct 33046 AGTCTTGAAGCCGAAAAAGTTGTACTTGAAA--TCGCGGTCGTACACAATAGCTGAGTTG 33103 Query 72655 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGT 72714 |||| || || ||| | ||||| || || |||| || || || | | | Sbjct 33104 AGTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGC 33163 Query 72715 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 72774 ||| ||| || || || || || | | ||| || || || ||| | || Sbjct 33164 TTCTTATTCTTTGGGTTGACGTAATGGTATAGGTCTGAAATAACGAGGGAGAATTGCTTC 33223 Query 72775 tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGA 72834 ||||| | | |||| || ||||| || ||||| | || || |||||||| || ||||| Sbjct 33224 TTTGTCTGCCTGTGAAGGTTTGAAACAGCTATACGAGCAGCAAGAATGGCGTAGCCTGGA 33283 Query 72835 TGTTGTGTAGT 72845 ||| ||||| Sbjct 33284 TGTGTGGTAGT 33294 >seq512 Length=20657 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138 ||| ||||||||||| | | || | | || || || || || |||||||| | ||| Sbjct 4318 GTGGAGACCCTCATCACGAGAGATAAGCTMTTTSGAGAATGTAAGACCGGGCATCAAGCC 4259 Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198 |||||| || ||||| || | ||| || || |||||||| |||||||| || || || || Sbjct 4258 ACGCTTCTTCAGCCAGAAGACAGAGGCGAAGGATCCAGAGAAGAAGATACCCTCAACAGC 4199 Query 42199 CGCAAAGGC 42207 || ||||| Sbjct 4198 GGCGAAGGC 4190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671130827538480