Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20parasiticus_20[genbank_20GCA_5F001576805.1_202016-02-
26] 998 sequences; 30,136,366 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq336 197 2e-46
seq181 159 5e-35
>seq336
Length=31807
Score = 197 bits (218), Expect = 2e-46
Identities = 194/248 (78%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||
Sbjct 10099 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 10041
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||||||||| |||||||||||||| ||||||||| |||||| || |||| || ||||
Sbjct 10040 TCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 9981
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | |||| |||||| || || |||| ||| ||| || ||| || |
Sbjct 9980 CCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTG 9921
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| ||||| || | || |||||||||| | || |||||||
Sbjct 9920 AGCACGCCAAGCGCAAGACCGTCACTTCTCTTGACGTCGTCTATGCCCTCAAGCGTCAAG 9861
Query 16671 GCCGTAAG 16678
| ||||||
Sbjct 9860 GACGTAAG 9853
>seq181
Length=50351
Score = 159 bits (176), Expect = 5e-35
Identities = 195/263 (74%), Gaps = 4/263 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| || |
Sbjct 17865 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCCA 17923
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
||| |||||| ||||| ||||| || ||||||||| |||| | || |||| || ||||
Sbjct 17924 TCCKTCGTCTCGCTCGCCGTGGKGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 17983
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTA-TCCATGATGCTTTCCACTATACC 16609
|||| |||| | ||| ||||| | | ||| | || | | | | || | || |||
Sbjct 17984 CCCGTGGTGTTCTCAAGTCCTTCCWGACGTCCGGCATTCAAGGTTACGTTAC-TTACACC 18042
Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669
|||||||| || |||||||| |||||||| |||| | ||||| || | || || ||
Sbjct 18043 GAGCACGCCAAGCGTAAGACCGTCACCTCGCTGGACGTGGTCTACGCCCTCAAGCGCCAG 18102
Query 16670 GGCCGTAAGATTTATGGTTTTGG 16692
||||||| | || ||||| ||
Sbjct 18103 GGCCGTACCCTCTACGGTTTCGG 18125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074287521614
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |