Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20parasiticus_20[genbank_20GCA_5F001576805.1_202016-02- 26] 998 sequences; 30,136,366 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq336 197 2e-46 seq181 159 5e-35 >seq336 Length=31807 Score = 197 bits (218), Expect = 2e-46 Identities = 194/248 (78%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| |||| Sbjct 10099 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 10041 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 10040 TCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 9981 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | |||| |||||| || || |||| ||| ||| || ||| || | Sbjct 9980 CCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTG 9921 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| || | || |||||||||| | || ||||||| Sbjct 9920 AGCACGCCAAGCGCAAGACCGTCACTTCTCTTGACGTCGTCTATGCCCTCAAGCGTCAAG 9861 Query 16671 GCCGTAAG 16678 | |||||| Sbjct 9860 GACGTAAG 9853 >seq181 Length=50351 Score = 159 bits (176), Expect = 5e-35 Identities = 195/263 (74%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| || | Sbjct 17865 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCCA 17923 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 ||| |||||| ||||| ||||| || ||||||||| |||| | || |||| || |||| Sbjct 17924 TCCKTCGTCTCGCTCGCCGTGGKGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 17983 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTA-TCCATGATGCTTTCCACTATACC 16609 |||| |||| | ||| ||||| | | ||| | || | | | | || | || ||| Sbjct 17984 CCCGTGGTGTTCTCAAGTCCTTCCWGACGTCCGGCATTCAAGGTTACGTTAC-TTACACC 18042 Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669 |||||||| || |||||||| |||||||| |||| | ||||| || | || || || Sbjct 18043 GAGCACGCCAAGCGTAAGACCGTCACCTCGCTGGACGTGGTCTACGCCCTCAAGCGCCAG 18102 Query 16670 GGCCGTAAGATTTATGGTTTTGG 16692 ||||||| | || ||||| || Sbjct 18103 GGCCGTACCCTCTACGGTTTCGG 18125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074287521614