Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20parasiticus_20[genbank_20GCA_5F001576805.1_202016-02-
26] 998 sequences; 30,136,366 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq24 105 7e-18
seq697 104 3e-17
>seq24
Length=106521
Score = 105 bits (116), Expect = 7e-18
Identities = 134/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||| || || ||||| || ||| || || | || || ||||||||||| ||||| |
Sbjct 88974 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 89033
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| || ||||||||||||| || | || |||||||||| ||| || |||| ||| |
Sbjct 89034 TCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 89092
Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||||||||| || || |||| || ||||| || ||||| || ||||| ||
Sbjct 89093 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 89152
Query 42198 AA 42199
||
Sbjct 89153 AA 89154
>seq697
Length=12154
Score = 104 bits (114), Expect = 3e-17
Identities = 155/219 (71%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| ||||| || || ||||||||||| || |||||||| || | || || || |
Sbjct 6918 ACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGGATATTGTAGTCTGAGAGCGTGCGTCC 6859
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| ||||||||||||||||| | || || || |||||||| | || | | ||||||
Sbjct 6858 ATCCTCTAGCTGCTTACCAGCAACGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTT 6799
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169
||| ||| ||| ||| | | | ||||| |||| || || || | ||
Sbjct 6798 GTCTTGGATCTTTGACATGACGTTATCGATAGTGTCCGAGCTC---TCAACTTCCAAAGT 6742
Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| || ||||| || |||||||| || ||||| |||||
Sbjct 6741 GATAGTCTTGCCAGTAAGCGTCTTAACGAAGATCTGCAT 6703
Score = 87.8 bits (96), Expect = 2e-12
Identities = 129/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||| || | |||||| || |||| || |||||||||||||||||
Sbjct 6437 TCCTTCTGGATGTTGTAGTCCGACAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAG 6378
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | ||||||||||||| || | || ||||||| | || | || | | | |||
Sbjct 6377 ATCAAACGCTGCTGGTCGGGAGGAATGCCTTCCTTGT-CTTGGATCTTGCTCTTAACGTT 6319
Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | || ||||| || || || || | ||||| || || || || || ||||| ||
Sbjct 6318 GTCGATGGTATCGCTTGACTCAACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 6259
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| |||||||| ||| || || || |||||||| | || || || | || ||
Sbjct 6683 ACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAGGTGCGACCATCTTCG 6624
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|| ||||| || ||||| ||||| ||||||||||| | || | | ||| || | | ||
Sbjct 6623 AGTTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGGGGAATTCCCTCTTTAT-CTTG 6565
Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
| |||||| || | | | | ||||||| ||||| || || | || || || ||
Sbjct 6564 AGTTTTTGACTTCACATTATCGATCGTGTCGGATGATTCAACCTCCAGTGTAATTGTCTT 6505
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || ||||| || || || |||||
Sbjct 6504 TCCGGTGAGAGTCTTGACGAAAATCTGCAT 6475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543206023420320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |