Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20parasiticus_20[genbank_20GCA_5F001576805.1_202016-02- 26] 998 sequences; 30,136,366 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq423 96.9 3e-14 seq697 89.7 4e-12 >seq423 Length=26609 Score = 96.9 bits (106), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 |||| | | || || | || || || || || || || ||||| || ||||| || || Sbjct 24884 GTTAAGAACGCCGTCGTCACCGTTCCCGCCTACTTCAACGACTCCCAGCGTCAGGCKACC 24825 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || ||||| || | |||||||| ||||| || |||||| | |||| || ||||||||| Sbjct 24824 AAGGATGCCGGTCCGATTGCTGGTCTTAACGTCCTTCGTGTCGTCAACGAGCCTACTGCT 24765 Query 550511 GCTGCACTTGCATATGG 550527 ||||| ||||| ||||| Sbjct 24764 GCTGCCCTTGCCTATGG 24748 >seq697 Length=12154 Score = 89.7 bits (98), Expect = 4e-12 Identities = 116/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| ||||| || ||||| ||||| || | ||||| ||||| |||||||| ||||| Sbjct 6630 ATCTTCGAGTTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGGGGAATTCCCTCTTT 6571 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAA 563437 ||||||| ||||| || || || || || || | ||| | | || || |||| Sbjct 6570 ATCTTGAGTTTTTGACTTCACATTATCGATCGTGTC-GGATGATTCAACCTCCAGTGTAA 6512 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || || || ||||| || |||||||| |||||| Sbjct 6511 TTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCATA 6474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029243221259020