Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20parasiticus_20[genbank_20GCA_5F001576805.1_202016-02- 26] 998 sequences; 30,136,366 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq697 145 2e-29 seq24 120 7e-22 >seq697 Length=12154 Score = 145 bits (160), Expect = 2e-29 Identities = 158/206 (77%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| ||||| || || || || ||||| ||| || ||| Sbjct 6478 CAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACACTGGAGGTTGAATCATCCGAC 6537 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||| | ||| || ||||| ||||| || || |||||||| Sbjct 6538 ACGATCGATAATGTGAAGTCAAAAACTCAAGATAAAGAGGGAATTCCCCCTGACCAGCAG 6597 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || || || |||||||| || || ||||||||||| | || |||| ||||||| ||| | Sbjct 6598 CGTCTCATTTTCGCCGGCAAGCAACTCGAAGATGGTCGCAC-CTTGTCCGATTACAACAT 6656 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 ||| ||||| || ||| |||| |||| Sbjct 6657 CCAGAAAGAGTCTACATTGCA-CTTG 6681 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||| | || || || ||||| ||| Sbjct 6706 CAGATCTTCGTTAAGACGCTTACTGGCAAGACTATCACTTTGGAAGTTGAGAGCTCGGAC 6765 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||||| |||||| || ||||| || || || || || ||||||||| Sbjct 6766 ACTATCGATAACGTCATGTCAAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAGCAA 6825 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||| | || || || ||||| || |||||| | || || | || || || || Sbjct 6826 CGTCTTATCGTTGCTGGTAAGCAGCTAGAGGATGGACGCACGCTCTCAGACTACAATATC 6885 Query 178104 CAAAAAGA 178111 || || || Sbjct 6886 CAGAAGGA 6893 Score = 104 bits (114), Expect = 6e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||| |||||||| ||||||||||| || ||||| || ||||| || ||| Sbjct 6005 GACACTATCGATAACGTCAAGAGCAAGATTCAGGATAAGGAAGGCATTCCTCCTGATCAG 6064 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | |||||||| || || ||||| || ||||| | || || | || |||||| Sbjct 6065 CAGCGCTTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTCTCTGACTATAAC 6124 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTT 178130 |||| || || || || || || |||||| Sbjct 6125 ATCCAGAAGGAGTCCACCCTTCACCTTGTT 6154 >seq24 Length=106521 Score = 120 bits (132), Expect = 7e-22 Identities = 142/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || ||||| || || || || |||||||| || || ||| ||||| Sbjct 89155 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 89099 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 89098 CATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCG 89039 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || ||||| || ||||| | || || ||| || ||| |||| Sbjct 89038 TCTGATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 88979 Query 178106 AAAAGAATCAA 178116 || | || || Sbjct 88978 GAAGGTATGAA 88968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203715808039612