Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20persii_20[genbank_20GCA_5F002215965.1_202017-07-07] 12 sequences; 38,414,373 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq5 163 3e-35 seq7 116 4e-21 >seq5 Length=6125278 Score = 163 bits (180), Expect = 3e-35 Identities = 592/908 (65%), Gaps = 30/908 (3%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 |||||||||||||| | |||| | ||| ||| ||| || | || || | | | | Sbjct 4043871 TCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCGTTGGGGCAGAAGAGGGTC 4043812 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 54069 || || |||| ||| || || ||||| || || || ||| |||| ||||| ||| || Sbjct 4043811 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGAGTCCAGAGAGC-ATAGAA 4043753 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGC 54126 ||||| | || ||| ||| || || || | |||||| ||||| | ||| | Sbjct 4043752 AAGATCACGGGCTCTCACTTCTTCCTTGCC---GTGGTTTTTACGGAGATCCAAGAATTC 4043696 Query 54127 CATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCC 54186 | | ||| || ||||| || |||| || |||| | | | || || || ||||| || Sbjct 4043695 GAAGACATCCGAGTGCCAGGGCTCCAGATAGATGGCGAAAGCACCCGGACGCTTGTTGCC 4043636 Query 54187 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 54246 ||||| || | || | ||| ||||| || | || | | ||| |||| ||||| || Sbjct 4043635 ACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAGGAACGATACCGTT 4043576 Query 54247 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-A 54305 ||| | ||| ||||| ||| || ||| ||| | ||||| || | | | | | | Sbjct 4043575 GGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGAT-TCGGTGAACGTTGA 4043517 Query 54306 GACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 54365 |||| || || || || | || ||||| | || ||| || | || ||||| || | Sbjct 4043516 GACCGATACCACCAGCGGTCTTGGAGATCATCGCACATGTCTTCAGAGTGTCATAAATAC 4043457 Query 54366 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT-- 54423 | || || || || ||| |||| | | || || || | || || | ||| | || Sbjct 4043456 CATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCA-CGAGGCA--AGCTGA-GGCTGG 4043401 Query 54424 --AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 54481 |||||| ||||| || | |||||| ||||| ||||| || |||| | || | | Sbjct 4043400 GGAGTTCCGGCATTGAACAGGGTAGGGGAAGCATGCGTGAAGTATTTCTGGGACATCAAG 4043341 Query 54482 TTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 54541 | || |||||||| || || |||||| | ||| || || || || |||||||| Sbjct 4043340 TGATAGGTCTCGATGGCGCGCTCGATATCCTCTCCATGGATACCAACGGCCACACGCATC 4043281 Query 54542 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCC 54601 | || |||||||| | ||| | | ||| | || ||||| ||| ||| ||| Sbjct 4043280 AGCAGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAGGTATGATCGTTCG 4043221 Query 54602 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGT 54659 | || || || ||||| ||||||| ||||| || || || || | ||| | |||| Sbjct 4043220 AGGGTCTTGAAGCCAAAGAAGTTGTAGTTGAAA--TCACGGTCATACACAATGGCCGAGT 4043163 Query 54660 TGAGTTTATCCTTATATTTGTTAACTACATC-CATGGTAATACTT-GAAATAATCGGAGA 54717 |||||| ||| || || ||||| || ||| | | ||| || || ||||| | Sbjct 4043162 TGAGTTCATCAGCATGCTTCATAACTGTCTCATATGTT--TCCTTCGATATCATCGGTGC 4043105 Query 54718 ATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACT--AAAT 54775 | ||| |||||| || || ||||||| | | || || || || | ||| Sbjct 4043104 TGGCTTCTTATTTTTCGGGTTTACATAGTGGTAGAGGTCGGAGATGAC--CAGTGAGAAT 4043047 Query 54776 AGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAA 54835 | || || || | ||||| || || || ||||| || | || || || |||||||| Sbjct 4043046 TGCTTCTTGGTCTGCTTGTGGAGGTTCGACACGGCAATACGTGCAGCGAGGATGGCATAG 4042987 Query 54836 TCCGGATG 54843 || || || Sbjct 4042986 TCGGGGTG 4042979 >seq7 Length=4596147 Score = 116 bits (128), Expect = 4e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190 ||| || ||||| ||| ||| ||||||||||| | | || | ||||| || || || Sbjct 736342 CAAGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 736283 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250 || |||||||| ||||||||||| ||||||||||| ||||| ||||| || || || || Sbjct 736282 CAGACCGGGCATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAA 736223 Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 |||||| || || || || || || |||| Sbjct 736222 GAAAATACCCTCAACGGCGGCGAAAGCAA 736194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721510941760