Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20persii_20[genbank_20GCA_5F002215965.1_202017-07-07] 12 sequences; 38,414,373 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq5 109 6e-19 seq1 86.0 7e-12 >seq5 Length=6125278 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 2080534 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 2080475 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||||| || | || |||||||||| ||| || |||| ||| | Sbjct 2080474 TAAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 2080416 Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 2080415 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2080356 Query 43173 AA 43174 || Sbjct 2080355 AA 2080354 Score = 104 bits (114), Expect = 3e-17 Identities = 126/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | |||||| || | || || |||||||| |||||||| Sbjct 2775005 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 2775064 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || |||||||| || | || | || |||||||||| ||| || |||| ||| Sbjct 2775065 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 2775123 Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | ||||||||||| || || |||| |||||||| ||||| || Sbjct 2775124 TGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 2775172 Score = 102 bits (112), Expect = 9e-17 Identities = 155/214 (72%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| |||| || |||||||| || || ||||| || | || || || | || || Sbjct 2774238 ACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGTCCATCCTCA 2774297 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||||||||| || || || || ||||||||||| | || | || |||||| | | || Sbjct 2774298 AGCTGCTTACCCGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTAT-CTTG 2774356 Query 43095 ATTTTTTGT-TTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149 | |||| | |||| ||| | | | |||||| ||| |||||| || | |||||| | Sbjct 2774357 AATTTTGCTCTTGA-CGTTGTCGATCGTGTCCGAGCT---TTCCACCTCCAACGTGATCG 2774412 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | ||||| || || ||||| || ||||| ||||| Sbjct 2774413 TCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 2774446 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||||| || | ||| |||||||| || ||||| || | || || || | Sbjct 2774688 CGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCA 2774747 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||||||||| || || | ||||||||||| | || | || ||||||| Sbjct 2774748 TCTTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTG 2774807 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || || | | | | |||||||| ||||| || || | |||||| Sbjct 2774808 TCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGCTGGATTCAACCTCAAGGGTGATG 2774867 Query 43149 GTTTTGCCCGTTAGCGTCTTTAC 43171 || || || || || || || || Sbjct 2774868 GTCTTTCCAGTGAGGGTTTTGAC 2774890 >seq1 Length=6575408 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||||| || | || |||||| || || ||||| || | ||||| || || Sbjct 1667010 CGCAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCG 1666951 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || ||||||||||||||||| || || ||||||||||||| || | | ||||||| Sbjct 1666950 TCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCCTTG 1666891 Query 43089 TCCAT 43093 || || Sbjct 1666890 TCTAT 1666886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817514227360