Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20persii_20[genbank_20GCA_5F002215965.1_202017-07-07] 12 sequences; 38,414,373 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq5 152 6e-32 seq7 116 5e-21 >seq5 Length=6125278 Score = 152 bits (168), Expect = 6e-32 Identities = 587/905 (65%), Gaps = 24/905 (3%) Strand=Plus/Minus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || ||||||||||| | |||| | ||| || ||| || | || || | | | | Sbjct 4043871 TCAAACTCGTCTCCGTACACATCGGCCAGTCCTGGAGCCTCGTTGGGGCAGAAGAGGGTC 4043812 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307 || || |||| ||| || || ||||| || || || ||| |||| ||||| ||| || Sbjct 4043811 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGGTCCGGAGTCCAGAGAGC-ATAGAA 4043753 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGC 63364 ||||| | | ||| ||| || || || | |||||| ||||| | ||| | Sbjct 4043752 AAGATCACGGGCTCTCACTTCTTCCTTGCC---GTGGTTTTTACGGAGATCCAAGAATTC 4043696 Query 63365 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCC 63424 | | ||| || ||||| || |||| || ||||| | | | || || || ||||| || Sbjct 4043695 GAAGACATCCGAGTGCCAGGGCTCCAGATAGATGGCGAAAGCACCCGGACGCTTGTTGCC 4043636 Query 63425 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTT 63484 ||||| || | || | ||| ||||| || | || | | ||| |||| |||||||| Sbjct 4043635 ACCCTGGTCAACATACCGAGCAGTGTTGTTGAACACACGGAGCATAGGAACGATACCGTT 4043576 Query 63485 TGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT-A 63543 || ||| ||||| ||| || ||| ||| | ||||| || | | | | | | Sbjct 4043575 GGAAGAACCGTTGGTTCCGCCAATGTAGGACCCAGTAGCACGGAT-TCGGTGAACGTTGA 4043517 Query 63544 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGC 63603 |||| || || || || | || ||||| | || ||| || | |||||||| || | Sbjct 4043516 GACCGATACCACCAGCGGTCTTGGAGATCATCGCACATGTCTTCAGAGTGTCATAAATAC 4043457 Query 63604 CTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC-ATTTGGTGACGAGTA 63662 | || ||||| || || |||| | | || || || | || | | || | | | | Sbjct 4043456 CATCAATGCTGTCCTCCTTCATATCGACCAGGAAGCA-CGAGGCAAGCTGAGGCTGGGGA 4043398 Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722 ||||| ||||| || | |||||| ||||| ||||| || |||| | || | | | Sbjct 4043397 GTTCCGGCATTGAACAGGGTAGGGGAAGCATGCGTGAAGTATTTCTGGGACATCAAGTGA 4043338 Query 63723 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63782 || ||||| || || || |||||| | ||| || || || || |||||||| | | Sbjct 4043337 TAGGTCTCGATGGCGCGCTCGATATCCTCTCCATGGATACCAACGGCCACACGCATCAGC 4043278 Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842 | |||||||| | ||| ||| || | || || || ||| ||| ||| | Sbjct 4043277 AGATGCTGAGGACGCTCAGCAACCTTTCCATCTACCCGCAGCAGGTATGATCGTTCGAGG 4043218 Query 63843 GTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGA 63900 || || || ||||| ||||||| ||||| || || || || | ||| |||| |||| Sbjct 4043217 GTCTTGAAGCCAAAGAAGTTGTAGTTGAAA--TCACGGTCATACACAATGGCCGAGTTGA 4043160 Query 63901 GCTTATCCTTATATTTGTTAACTATATC-CATGGTAATACTT-GAAATAATCGGAGAATG 63958 | | ||| || || ||||| | || ||| | | ||| || || ||||| | | Sbjct 4043159 GTTCATCAGCATGCTTCATAACTGTCTCATATGTT--TCCTTCGATATCATCGGTGCTGG 4043102 Query 63959 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACT--AAATAGt 64016 ||| |||||| || || ||||||| | | | || || || || | ||| | Sbjct 4043101 CTTCTTATTTTTCGGGTTTACATAGTGGTAGAGGTCGGAGATGAC--CAGTGAGAATTGC 4043044 Query 64017 ttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCC 64076 || || || | |||||| || || || | ||| || | || || || |||||||| || Sbjct 4043043 TTCTTGGTCTGCTTGTGGAGGTTCGACACGGCAATACGTGCAGCGAGGATGGCATAGTCG 4042984 Query 64077 GGATG 64081 || || Sbjct 4042983 GGGTG 4042979 >seq7 Length=4596147 Score = 116 bits (128), Expect = 5e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 ||| || ||||| ||| ||| ||||||||||| | | || | ||||| || || || Sbjct 736342 CAAGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 736283 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 || |||||||| ||||||||||| ||||||||||| |||||||| || || ||||| || Sbjct 736282 CAGACCGGGCATCAGGCCACGCTTCTTAAGCCAAAAGATGGAAGCAAAAGACCCGGAGAA 736223 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 ||| || || || || || || || |||| Sbjct 736222 GAAAATACCCTCAACGGCGGCGAAAGCAA 736194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817505527360