Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20persii_20[genbank_20GCA_5F002215965.1_202017-07-07] 12 sequences; 38,414,373 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq7 100 6e-16 seq11 95.1 3e-14 >seq7 Length=4596147 Score = 100 bits (110), Expect = 6e-16 Identities = 293/442 (66%), Gaps = 12/442 (3%) Strand=Plus/Plus Query 243318 CGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CCATCTTTTGGCTGCGGAACAAAG 243376 |||||| |||||| | || |||||| ||| ||| ||||||||||||| ||| | Sbjct 736207 CGTTGAGGGTATTTTCTTCTCCGGGTCTTT-TGCTTCCATCTTTTGGCTTAAGAAGCGTG 736265 Query 243377 GTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACC 243436 | ||||||| || || | || |||||| ||||| ||| |||||||| || ||| Sbjct 736266 GCCTGATGCCCGGTCTGACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGGTCTCCACA 736325 Query 243437 AACAGTTCGGTGAGCTTA-TGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAACGGT- 243494 | |||| |||| | | || | ||| ||||| | || | | | ||| Sbjct 736326 CCGACTTCGCCT-GCTTGCTCTTCTCTCACCTC---AACAACCGCCCCAGCAAGAAGGTT 736381 Query 243495 --CAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATT 243552 | | | |||||| || || ||| | || ||||| ||| | ||| || | Sbjct 736382 GTCGAGGACATCATCGTTGAGGCTGTTTCCATTGAGAAGGAGTTCTTGACCGATGCCCTC 736441 Query 243553 CCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCC 243612 || || || | ||||||||||| | || ||| | ||||||||||| ||||| || Sbjct 736442 CCCTGTGCCCTCCTGGGCATGAACTCCAACCTGATGTGCCAGTACATCGAGTTCGTGGCT 736501 Query 243613 GACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCC 243672 ||||| | | |||| || || | | ||| | ||| ||| |||||||| | | Sbjct 736502 GACCGTCTCCTGGTCGCTCTCGGCAACGCGAAGTACTTCAATGCCACCAACCCCTTCGAC 736561 Query 243673 TTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGAT 243732 || |||||| || ||||| || || || ||||||||||| ||||||||| |||| Sbjct 736562 TTCATGGAGTCGATCTCGCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGAC 736621 Query 243733 TATCA-ACGCCCTGGTGTGATG 243753 || || | | || ||||||||| Sbjct 736622 TACCAGAAGGCC-GGTGTGATG 736642 >seq11 Length=3384867 Score = 95.1 bits (104), Expect = 3e-14 Identities = 237/358 (66%), Gaps = 9/358 (3%) Strand=Plus/Minus Query 333637 TGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGG 333696 ||||||| | |||| ||||| | |||||||| | | || | ||| |||| Sbjct 1949975 TGATACCAGCCAGGATACCGGGAGCAGGGAACTTGAAGGAAACCTGGGAAGCGGACAGGG 1949916 Query 333697 CGTAGTAACTCGCTGATTCGGGACGCTT---CTTCACGAACTCGGACAGATTTCCCTTGT 333753 |||||| ||| | ||||| ||| ||| || || |||| ||| || ||||||| Sbjct 1949915 TGTAGTAGCTCTTGGCCTCGGG---CTTGACCTTGACAAAGTCGGCCAGGTTACCCTTGT 1949859 Query 333754 ACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGA 333813 | ||||| | | |||||| ||| || ||||| || ||||||||| Sbjct 1949858 AGCAGACGAGCTTCTTGCT---TTCGTAGTGGTAGATGTCCGTGCACACCTCGTCGAGGA 1949802 Query 333814 ACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAA 333873 ||||||||||||| || |||| | | | ||| | | || |||||||||| Sbjct 1949801 ACCCGGAGTCGTGACTGACGATCAAACTGGTGATGTCGGTGTGCTTCTTCAGGTATTCCT 1949742 Query 333874 TCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCT 333933 || |||| | ||||| | ||| |||||||| || || ||||| || || || | | Sbjct 1949741 GCAACCACTTGACGTTGGCCACGTCCAGATGGTTAGTAGGTTCGTCCAGTAGGAGCACGT 1949682 Query 333934 TTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991 || |||| ||||| |||||||| || || || ||||| ||||| || || || || Sbjct 1949681 CGGCCTTCATCAGCATGGCACGTGCCAGCGCCAGCTTCATCTTCCAACCACCGGACAG 1949624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879830432200