Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20persii_20[genbank_20GCA_5F002215965.1_202017-07-07] 12 sequences; 38,414,373 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 3e-14 seq1 84.2 1e-11 >seq5 Length=6125278 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || |||| ||||| ||||| ||| |||||||| ||||| || || || || || || Sbjct 2774685 AGGCGCAGAACCAAGTGGAGCGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGG 2774744 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || || ||||| ||||| || |||||||| ||||| || || | |||||| Sbjct 2774745 CCATCTTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCC 2774804 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 2774805 TTGTCCTGGATCTT 2774818 >seq1 Length=6575408 Score = 84.2 bits (92), Expect = 1e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || |||| ||||| || || || |||||| || ||||| || || ||||| || || Sbjct 1667013 AGGCGCAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGG 1666954 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || ||||| || || || | |||||| ||||| || || | ||||||| Sbjct 1666953 CCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATTCCCTCC 1666894 Query 34609 TTGTCT 34614 |||||| Sbjct 1666893 TTGTCT 1666888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729553970796