Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20persii_20[genbank_20GCA_5F002215965.1_202017-07-07] 12 sequences; 38,414,373 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 2e-12 >seq5 Length=6125278 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || || || ||| || || || | || |||||||| || || || || ||| Sbjct 2080532 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 2080473 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCC 39216 |||||||||||||||| ||| | || ||| |||||| ||| || |||| ||| | | Sbjct 2080472 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTC 2080414 Query 39217 -ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAA 39275 | || ||||||||||| ||||| | || || | || |||||||| || || || || Sbjct 2080413 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2080354 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || ||||| ||||| || || || || || || | || || ||| | || ||| Sbjct 2774238 ACCAGGTGCAGCGTACTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGTCCATCCTCA 2774297 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || |||||||| || |||||||||||||| | || | || ||| || || Sbjct 2774298 AGCTGCTTACCCGCAAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGA 2774357 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATACT 39251 ||||| |||| ||| | | | ||| || ||| ||||| |||| |||||| | Sbjct 2774358 ATTTTGCTCTTGA-CGTTGTCGATCGTGTCCGAGCT---TTCCACCTCCAACGTGATCGT 2774413 Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || || ||||| ||||| Sbjct 2774414 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 2774446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545537178956