Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq60 100 6e-16 >seq60 Length=71262 Score = 100 bits (110), Expect = 6e-16 Identities = 306/469 (65%), Gaps = 8/469 (2%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 |||||| | |||||||| || | | |||||| ||||| | || || || || Sbjct 42259 TTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTT 42318 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 | | ||||| |||||| ||| || |||||||||| ||| | || |||||| Sbjct 42319 GCCTCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAG 42378 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCAAAGCT 230351 ||||| || || |||||||| || | || | | |||| ||| || | || Sbjct 42379 CTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGCCT-GCTTGCTGTTCTCTCACCT 42437 Query 230352 CCAGAACAAGCTACCATTCGAGACGGTCA---AACAAATCATTACAGAAGCAGTTGAAAA 230408 | ||||| | || | ||| ||| | | ||||| | || || |||| | Sbjct 42438 C---AACAACCGCCCTAGCAAGAAGGTGGTTGAGGACATCATCATTGAGGCTGTTGCCAT 42494 Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACT 230468 || ||||||||| | || ||| | || ||| || | ||||||||| | | || Sbjct 42495 TGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTGCTCTCCTCGGCATGAACTCCAATCT 42554 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 ||| | ||||| || |||||||| |||||||| | | || || || || || |||| Sbjct 42555 GATGTGCCAGTATATTGAATTCGTTGCCGACCGTCTACTGGTCGCTCTCGGCAACAAGAA 42614 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588 | ||| | | |||||||| | || |||||| || || ||| || ||||| Sbjct 42615 GTACTTCAATGCCACCAACCCCTTCGATTTCATGGAGTCTATCTCCCTTGCTGGCAAGAC 42674 Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||| || |||||||| |||| || |||| | | ||||| ||| Sbjct 42675 CAACTTCTTTGAGAAGCGTGTGGGTGATTACCAGAAGGCCGGTGTTATG 42723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057767387573510