Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq60 100 6e-16
>seq60
Length=71262
Score = 100 bits (110), Expect = 6e-16
Identities = 306/469 (65%), Gaps = 8/469 (2%)
Strand=Plus/Plus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
|||||| | |||||||| || | | |||||| ||||| | || || || ||
Sbjct 42259 TTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTT 42318
Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292
| | ||||| |||||| ||| || |||||||||| ||| | || ||||||
Sbjct 42319 GCCTCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAG 42378
Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCAAAGCT 230351
||||| || || |||||||| || | || | | |||| ||| || | ||
Sbjct 42379 CTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGCCT-GCTTGCTGTTCTCTCACCT 42437
Query 230352 CCAGAACAAGCTACCATTCGAGACGGTCA---AACAAATCATTACAGAAGCAGTTGAAAA 230408
| ||||| | || | ||| ||| | | ||||| | || || |||| |
Sbjct 42438 C---AACAACCGCCCTAGCAAGAAGGTGGTTGAGGACATCATCATTGAGGCTGTTGCCAT 42494
Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACT 230468
|| ||||||||| | || ||| | || ||| || | ||||||||| | | ||
Sbjct 42495 TGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTGCTCTCCTCGGCATGAACTCCAATCT 42554
Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528
||| | ||||| || |||||||| |||||||| | | || || || || || ||||
Sbjct 42555 GATGTGCCAGTATATTGAATTCGTTGCCGACCGTCTACTGGTCGCTCTCGGCAACAAGAA 42614
Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588
| ||| | | |||||||| | || |||||| || || ||| || |||||
Sbjct 42615 GTACTTCAATGCCACCAACCCCTTCGATTTCATGGAGTCTATCTCCCTTGCTGGCAAGAC 42674
Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||||||| || |||||||| |||| || |||| | | ||||| |||
Sbjct 42675 CAACTTCTTTGAGAAGCGTGTGGGTGATTACCAGAAGGCCGGTGTTATG 42723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057767387573510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |