Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq127 176 5e-39
seq60 86.0 7e-12
>seq127
Length=50345
Score = 176 bits (194), Expect = 5e-39
Identities = 549/841 (65%), Gaps = 12/841 (1%)
Strand=Plus/Plus
Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 54069
||| || |||| ||| || || ||||| || ||||||||| |||| ||||| ||
Sbjct 26332 CCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAA 26391
Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129
| ||| | | ||| ||| || ||||| ||||| || || | |||| | |
Sbjct 26392 CAAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAA 26451
Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189
| ||| || ||||| || |||| || |||| | | || || || |||||||| ||
Sbjct 26452 GACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACC 26511
Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249
||| || | ||||||||| |||||||| | || | || ||| |||| ||| ||||||||
Sbjct 26512 CTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGA 26571
Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 54307
|| |||||||| ||| || || || |||||||||| | | |||| ||
Sbjct 26572 TGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGA--GA 26629
Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC-GTATCATAGATGCC 54366
|| || || || || | || || || | || || ||| || | || || ||||||||
Sbjct 26630 CCAATACCACCGGCAGTCTTGGAAATCATAGCACA-CGTCTTCAGTGTGTCGTAGATGCC 26688
Query 54367 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 54426
||| || || || ||| |||||| || | || ||| | || || | | ||
Sbjct 26689 CTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGT 26748
Query 54427 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 54486
|| ||||| || | || || ||||| || || || | || | || | || |||||
Sbjct 26749 ACCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTA 26808
Query 54487 CGTCTCGATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 54544
|| || | || ||| || ||||| |||||||| || || |||||||| |
Sbjct 26809 GGTTTCAAGGGC--CTTCTCAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGG 26866
Query 54545 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAA 54604
| ||| || || | || | | |||| || | || | ||| || || |
Sbjct 26867 AGGTGTTGGGGACGCTCGGCAACCTTGCCATTGAGACGCAATAGGTAAGAACGCTCAAGG 26926
Query 54605 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGT 54664
||||| |||||||| |||||||| |||||| || ||||| | |||| | ||||||||
Sbjct 26927 GTTTTGAAACCAAAGTAGTTGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTTGAGC 26986
Query 54665 TTATCCTTATATTTGTTAACTACATC-CATGGTAATACTTGAAATAATCGGAGAATGTTT 54723
| |||| || ||| | || | || ||| | | |||| || || |||| | ||
Sbjct 26987 TCATCCGCATGTTTCATGACGATTTCATATGTTTCT-TTTGAGATCATAGGAGCAGACTT 27045
Query 54724 CCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttt 54783
| || || || |||||||||| | | ||| || || | || | || |
Sbjct 27046 CTTGTTCTTGGGGTTGACATAGTGGTAGAGATCTGAGATAACCAGAGAGAACTGCTTCCT 27105
Query 54784 tGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
||| | ||||| || || || || ||||| | |||||| || || ||||| || |||||
Sbjct 27106 TGTCTGCTTGTGGAGGTTGGAAACTGCTATACGAGCGGCCAGGATAGCATAGTCTGGATG 27165
Query 54844 T 54844
|
Sbjct 27166 T 27166
Score = 104 bits (114), Expect = 3e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764
|||| || ||||| || || || || ||||||| || | | |||| || ||||||
Sbjct 25978 GCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACTGTATTCAATAATCTCA 26037
Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824
|||||||| || | ||| ||||| | ||| | || |||||||| ||||||||
Sbjct 26038 GTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTTACTCTTCTTGTTACAA 26097
Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884
||||||||||| || ||||| || | ||||||||| |||||| || | ||| || | |
Sbjct 26098 GCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGCCTCCAGAATAGCATAC 26157
Query 53885 CA 53886
||
Sbjct 26158 CA 26159
>seq60
Length=71262
Score = 86.0 bits (94), Expect = 7e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185
|||| ||| || || || || ||| |||||||| || | || | ||||||||
Sbjct 42428 AACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAG 42369
Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245
|| ||||| || ||||| ||||||||||| || ||||| || || || ||||| || |||
Sbjct 42368 AAGGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCA 42309
Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 24277
|| || || || || || || || || || ||
Sbjct 42308 GAGAAAAAGATACCCTCAACAGCAGCGAAAGC 42277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593690600310960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |