Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq464 127 2e-24
seq81 111 1e-19
seq98 95.1 1e-14
>seq464
Length=17248
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | ||||| |||||||| |||||||| || || ||| || ||||||
Sbjct 12024 CACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCCTC 12083
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|| || ||||||||| |||||||||| ||||| || || || |||||||| || |||
Sbjct 12084 AAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCTTG 12143
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| ||| || || | |||| ||||| | |||||||||||| | || | || ||
Sbjct 12144 GATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCCAGTGTGATGGTCTT 12203
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || || || ||||||||
Sbjct 12204 TCCAGTGAGAGTCTTGACGAAGATCTGCAT 12233
Score = 123 bits (136), Expect = 2e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 118548 TCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAG 118607
|| || || |||||||| ||| | |||||| ||| || |||||||| |||||| ||
Sbjct 11815 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAG 11874
Query 118608 ATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGT 118667
|||||||||||||| || || || || ||||||||||| ||| ||| || || |
Sbjct 11875 ATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAATCTTTGTCTTGACATTG 11934
Query 118668 TCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 118727
|||| ||||| | |||||| ||||| | || | || || || || |||||||| ||
Sbjct 11935 TCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGACG 11994
Query 118728 AAAATCTGCAT 118738
|| ||||||||
Sbjct 11995 AAGATCTGCAT 12005
Score = 89.7 bits (98), Expect = 4e-13
Identities = 134/187 (72%), Gaps = 4/187 (2%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || ||||| |||||||||||||| ||| | ||| || || ||
Sbjct 12565 ACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCC 12624
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648
||||| || || ||| |||| || |||||||| || || || ||||||||||||| |||
Sbjct 12625 AGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 12684
Query 118649 AATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
| | || || || || | |||| ||||| | ||| ||||| | ||| | || |
Sbjct 12685 A--TCTTGGTCTTGACGTTGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATGGTCT 12742
Query 118708 TGCCGGT 118714
| |||||
Sbjct 12743 TTCCGGT 12749
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || || || || || |||||||| ||| || |||||| ||||||
Sbjct 12253 ACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCC 12312
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || || ||||| |||| | ||||||||| || || || || ||||||||||| |
Sbjct 12313 AGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGA 12372
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| || || | ||| ||||||| ||| | || ||
Sbjct 12373 ATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTA 12432
Query 118710 CCGGTCAGAGTTTTTACAA 118728
|| || || || || ||||
Sbjct 12433 CCAGTGAGGGTCTTGACAA 12451
>seq81
Length=63167
Score = 111 bits (122), Expect = 1e-19
Identities = 136/182 (75%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||||||| ||||| |||||||||||| ||||| ||| ||||
Sbjct 63019 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 62960
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668
|| |||||||| || || || ||||||||||||| ||| | | || || || || | |
Sbjct 62959 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 62902
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
||| |||||| | |||||| |||| ||| | || || || ||||| || || || |
Sbjct 62901 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 62842
Query 118729 AA 118730
||
Sbjct 62841 AA 62840
>seq98
Length=58949
Score = 95.1 bits (104), Expect = 1e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | || ||||| || || |||||||| || | |||||| ||||||
Sbjct 32954 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTC 33013
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || ||| |||| ||||||||||| || || || || |||||||||||| |
Sbjct 33014 GAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTAT 33073
Query 118649 AATTTTTTGTTT 118660
|||||| |||
Sbjct 33074 TTTTTTTTTTTT 33085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433808314914484
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |