Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq464 109 6e-19
seq81 96.9 4e-15
>seq464
Length=17248
Score = 109 bits (120), Expect = 6e-19
Identities = 147/201 (73%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046
||||| ||||| || || ||||| || | || || ||| | || |||||||| ||||||
Sbjct 11809 GTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCA 11868
Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 43105
||||| ||||| ||||||||||| | || | | |||||||||| ||| | ||||| ||
Sbjct 11869 GCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC-TGAATCTTTGTCTT 11927
Query 43106 GAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 43162
|| | | | ||||| |||| || || || | |||||||| || || |||||
Sbjct 11928 GACATTGTCGATTGTGTCAGAGCTC---TCAACCTCCAGTGTGATGGTCTTTCCAGTTAG 11984
Query 43163 CGTCTTTACAAAGATTTGCAT 43183
|| || || ||||| |||||
Sbjct 11985 AGTTTTGACGAAGATCTGCAT 12005
Score = 104 bits (114), Expect = 3e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||| ||||| || | ||||| || |||| || |||||||| || |||||
Sbjct 12582 CTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTGCCTGCGAA 12641
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | || |||||||||| ||| || |||| |||
Sbjct 12642 GATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGT 12700
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
| | | |||||||| || ||||| || | |||||||| || || ||
Sbjct 12701 TGTCGATAGTGTCGCTAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 12749
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/183 (73%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || || ||||| || | |||||| || | || || || ||||||||||| ||
Sbjct 12271 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAG 12330
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111
|| | ||||||||||| | || | | |||||||||| ||| | || || |||| |||
Sbjct 12331 ATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC-TGAATCTTGGTCTTGA-CGT 12388
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | || ||||| || ||||| |||| ||||| || || || || || ||||| |
Sbjct 12389 TGTCGATAGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGA 12448
Query 43171 CAA 43173
|||
Sbjct 12449 CAA 12451
>seq81
Length=63167
Score = 96.9 bits (106), Expect = 4e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || ||| || || | || || |||||||| || ||||| |
Sbjct 63021 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 62962
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | || |||||||||| ||| || |||| ||| |
Sbjct 62961 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 62903
Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||||||||| || || |||| || ||||| || ||||| || ||||| ||
Sbjct 62902 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 62843
Query 43173 AA 43174
||
Sbjct 62842 AA 62841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571787743973560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |