Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30]
4,177 sequences; 26,435,630 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq127 232 6e-56
seq60 127 2e-24
seq464 95.1 1e-14
>seq127
Length=50345
Score = 232 bits (256), Expect = 6e-56
Identities = 437/639 (68%), Gaps = 8/639 (1%)
Strand=Plus/Plus
Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401
||||| || |||| || ||||| || |||| ||||||||||||| || || || |
Sbjct 26348 TCAACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAACAAATCACGAGCTCTG 26407
Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461
|| || || || ||| |||||| | ||||| || || || || || | |||||
Sbjct 26408 ACTTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAGACATCGGAGTGCCAA 26467
Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521
||||| || |||| |||||| || || || | ||| || || ||||| || ||||| |
Sbjct 26468 GGCTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCCTGGTCAACGTATCTA 26527
Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581
|| ||||| ||| |||| | ||||| || || | || ||||| | ||| | ||
Sbjct 26528 GCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGATGAGCCAT-TGGTACC 26586
Query 23582 GCCACACTC-GAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|||| | |||||| | || |||| | || |||| || ||| || || ||| | |
Sbjct 26587 GCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGAGACCAATACCACCGGCAGT 26646
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || ||||| || || ||||| ||||||||||||||||| ||||||||||| ||
Sbjct 26647 CTTGGAAATCATAGCACACGTCTTCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTT 26706
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| | |||||||| || || | || || | | ||| ||| | || |||||| ||
Sbjct 26707 CATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGT 26766
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
||| || || || ||||| | ||||| || ||||| || || | ||| ||
Sbjct 26767 GGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGTTTCAAGGGCCTTCTC 26826
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG-- 23878
|||||| | ||||| || || | ||| || ||||||| | || ||| || | ||||
Sbjct 26827 AATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGAGGTGTTGGGGACGCTCGGC 26886
Query 23879 -ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937
||| | ||| || | || || || ||||| | | ||||| || ||||| ||
Sbjct 26887 AACCTT---GCCATTGAGACGCAATAGGTAAGAACGCTCAAGGGTTTTGAAACCAAAGTA 26943
Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976
|| ||||||||||| || |||| ||| || || || ||
Sbjct 26944 GTTGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTT 26982
>seq60
Length=71262
Score = 127 bits (140), Expect = 2e-24
Identities = 226/326 (69%), Gaps = 8/326 (2%)
Strand=Plus/Plus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| ||||| || || || ||||| || || || ||| |||||| | || || ||| ||
Sbjct 42277 GCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTTGCCTCGATCTTCTGGCTG 42336
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
||||| || ||||||||||| || || || || ||||||| | || || || || |||
Sbjct 42337 AAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAG 42396
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGAC---G 58157
||||| || ||||| ||||| ||| | ||| ||||||| |||| ||||| | |
Sbjct 42397 GGTCTTCACACTGACTTTGCCTGCTTGCTGTTCTCTCAC---CTCAA-CAACCGCCCTAG 42452
Query 58158 CGGGATCG-CATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216
| || | | |||||| |||| ||||| || || || || || ||||| | ||
Sbjct 42453 CAAGAAGGTGGTTGAGGACATCATCATTGAGGCTGTTGCCATTGAGAAGGAGTTCCTGAC 42512
Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276
|| || || || || | ||||| |||||| || |||||| |||| |||||
Sbjct 42513 AGAGGCTCTGCCTTGTGCTCTCCTCGGCATGAACTCCAATCTGATGTGCCAGTATATTGA 42572
Query 58277 GTTTGTTGCCGACAGACTTTTGCTCG 58302
|| ||||||||| | || || |||
Sbjct 42573 ATTCGTTGCCGACCGTCTACTGGTCG 42598
>seq464
Length=17248
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAA-ACA 31275
|| || || || |||||| | || || || | ||||| | |||| | ||||| ||
Sbjct 12749 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTAGCGACACTATCGACAACGTCAAGACC 12690
Query 31276 GAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAA 31335
||| | ||||||||| ||| | || || ||||||||||| || || ||||| |||||
Sbjct 12689 AAGA-TCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATCTTCGCAGGCAA 12631
Query 31336 ACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCA 31395
||| |||||||| ||| | ||| || ||||||||||| || |||||||| ||
Sbjct 12630 GCAGCTGGAAGACGGCCGTACTCTCTCCGACTACAACATTCAAAAGGAGTCGACTCTCCA 12571
Query 31396 TCTGGTACT 31404
||||| ||
Sbjct 12570 CCTGGTCCT 12562
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| || || || || ||||| | || || || |||
Sbjct 12233 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAGAGCTCC 12174
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | ||||| ||| ||| | || || || ||| | || || |||||
Sbjct 12173 GACACAATCGACAACGTCAAGACAAAGA-TCCAAGATAAAGAGGGCATCCCACCAGACCA 12115
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||| ||||| || |||||||| || || | || || | ||| || || || ||
Sbjct 12114 GCAACGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACAA 12055
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||| ||||||||||| || ||||| || || || | ||| | || ||||
Sbjct 12054 CATCCAAAAAGAATCTACCCTTCACCTTGTGCTCCGTCTGCGTGGTGGTA 12005
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || ||||| || || || || ||||| | || ||||| ||
Sbjct 12005 ATGCAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCT 11946
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | ||||| ||| ||| | ||||||||| || | || || |||||
Sbjct 11945 GACACAATCGACAATGTCAAGACAAAGATTCA-GGACAAGGAGGGTATTCCACCAGACCA 11887
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || |||||||| |||||| | ||||| || | ||| || ||
Sbjct 11886 GCAGCGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAA 11827
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||| || || ||| ||||| || ||||| |||
Sbjct 11826 CATCCAGAAGGAAAGCACTCTACACCTGGTCCTT 11793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445743125421840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |