Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq127 232 6e-56 seq60 127 2e-24 seq464 95.1 1e-14 >seq127 Length=50345 Score = 232 bits (256), Expect = 6e-56 Identities = 437/639 (68%), Gaps = 8/639 (1%) Strand=Plus/Plus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||| || |||| || ||||| || |||| ||||||||||||| || || || | Sbjct 26348 TCAACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAACAAATCACGAGCTCTG 26407 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || || || || ||| |||||| | ||||| || || || || || | ||||| Sbjct 26408 ACTTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAGACATCGGAGTGCCAA 26467 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||| || |||| |||||| || || || | ||| || || ||||| || ||||| | Sbjct 26468 GGCTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCCTGGTCAACGTATCTA 26527 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581 || ||||| ||| |||| | ||||| || || | || ||||| | ||| | || Sbjct 26528 GCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGATGAGCCAT-TGGTACC 26586 Query 23582 GCCACACTC-GAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 |||| | |||||| | || |||| | || |||| || ||| || || ||| | | Sbjct 26587 GCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGAGACCAATACCACCGGCAGT 26646 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || ||||| || || ||||| ||||||||||||||||| ||||||||||| || Sbjct 26647 CTTGGAAATCATAGCACACGTCTTCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTT 26706 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | | |||||||| || || | || || | | ||| ||| | || |||||| || Sbjct 26707 CATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGT 26766 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 ||| || || || ||||| | ||||| || ||||| || || | ||| || Sbjct 26767 GGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGTTTCAAGGGCCTTCTC 26826 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG-- 23878 |||||| | ||||| || || | ||| || ||||||| | || ||| || | |||| Sbjct 26827 AATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGAGGTGTTGGGGACGCTCGGC 26886 Query 23879 -ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 ||| | ||| || | || || || ||||| | | ||||| || ||||| || Sbjct 26887 AACCTT---GCCATTGAGACGCAATAGGTAAGAACGCTCAAGGGTTTTGAAACCAAAGTA 26943 Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || ||||||||||| || |||| ||| || || || || Sbjct 26944 GTTGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTT 26982 >seq60 Length=71262 Score = 127 bits (140), Expect = 2e-24 Identities = 226/326 (69%), Gaps = 8/326 (2%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||| || || || ||||| || || || ||| |||||| | || || ||| || Sbjct 42277 GCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTTGCCTCGATCTTCTGGCTG 42336 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||||||||| || || || || ||||||| | || || || || ||| Sbjct 42337 AAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAG 42396 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGAC---G 58157 ||||| || ||||| ||||| ||| | ||| ||||||| |||| ||||| | | Sbjct 42397 GGTCTTCACACTGACTTTGCCTGCTTGCTGTTCTCTCAC---CTCAA-CAACCGCCCTAG 42452 Query 58158 CGGGATCG-CATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | || | | |||||| |||| ||||| || || || || || ||||| | || Sbjct 42453 CAAGAAGGTGGTTGAGGACATCATCATTGAGGCTGTTGCCATTGAGAAGGAGTTCCTGAC 42512 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 || || || || || | ||||| |||||| || |||||| |||| ||||| Sbjct 42513 AGAGGCTCTGCCTTGTGCTCTCCTCGGCATGAACTCCAATCTGATGTGCCAGTATATTGA 42572 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCG 58302 || ||||||||| | || || ||| Sbjct 42573 ATTCGTTGCCGACCGTCTACTGGTCG 42598 >seq464 Length=17248 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAA-ACA 31275 || || || || |||||| | || || || | ||||| | |||| | ||||| || Sbjct 12749 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTAGCGACACTATCGACAACGTCAAGACC 12690 Query 31276 GAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAA 31335 ||| | ||||||||| ||| | || || ||||||||||| || || ||||| ||||| Sbjct 12689 AAGA-TCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATCTTCGCAGGCAA 12631 Query 31336 ACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCA 31395 ||| |||||||| ||| | ||| || ||||||||||| || |||||||| || Sbjct 12630 GCAGCTGGAAGACGGCCGTACTCTCTCCGACTACAACATTCAAAAGGAGTCGACTCTCCA 12571 Query 31396 TCTGGTACT 31404 ||||| || Sbjct 12570 CCTGGTCCT 12562 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || || ||||| | || || || ||| Sbjct 12233 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAGAGCTCC 12174 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| ||| ||| | || || || ||| | || || ||||| Sbjct 12173 GACACAATCGACAACGTCAAGACAAAGA-TCCAAGATAAAGAGGGCATCCCACCAGACCA 12115 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || |||||||| || || | || || | ||| || || || || Sbjct 12114 GCAACGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACAA 12055 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| ||||||||||| || ||||| || || || | ||| | || |||| Sbjct 12054 CATCCAAAAAGAATCTACCCTTCACCTTGTGCTCCGTCTGCGTGGTGGTA 12005 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||||| || || || || ||||| | || ||||| || Sbjct 12005 ATGCAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCT 11946 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| ||| ||| | ||||||||| || | || || ||||| Sbjct 11945 GACACAATCGACAATGTCAAGACAAAGATTCA-GGACAAGGAGGGTATTCCACCAGACCA 11887 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| |||||| | ||||| || | ||| || || Sbjct 11886 GCAGCGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAA 11827 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| || || ||| ||||| || ||||| ||| Sbjct 11826 CATCCAGAAGGAAAGCACTCTACACCTGGTCCTT 11793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445743125421840