Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20rambellii_20[genbank_20GCA_5F000986645.1_202015-04-30] 4,177 sequences; 26,435,630 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq60 113 9e-20 seq127 87.8 4e-12 >seq60 Length=71262 Score = 113 bits (124), Expect = 9e-20 Identities = 282/424 (67%), Gaps = 11/424 (3%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || || ||||| ||||| || ||||| || ||| | || || || || |||||| Sbjct 42274 GTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTTGCCTCGATCTTCTGG 42333 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| | || | ||||||||||||||| |||||| ||| |||| || | || Sbjct 42334 CTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGAT 42393 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 || |||||||| |||||||| ||| ||||||| | | | | || Sbjct 42394 GAGGGTCTTCACACTGACTTTGCCTGCTTGCTGTT------CTCTCACCTCAACAACCGC 42447 Query 102098 TCAAG--AGAAAG-GATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 | || |||| | | || || || ||| ||| || || ||||| | || || Sbjct 42448 CCTAGCAAGAAGGTGGTTGAGGACATCATCATTGAGGCTGTTGCCATTGAGAAGGAGTTC 42507 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214 || |||| | |||||| | | | || ||||||| ||| ||||| ||||||| Sbjct 42508 CTGACAGAGGCTCTGCCTTGTGCTCTCCTCGGCATGAACTCCAATCTGATGTGCCAGTAT 42567 Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAA-AAGCACTATAATGT 102273 |||||||| || || || ||| |||| | | || | | || ||| ||| |||| Sbjct 42568 ATTGAATTCGTTGCCGACCGTCTACTGGTCGCTCTCGG-CAACAAGAAGTACTTCAATGC 42626 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 |||||||||||| |||||||| ||| ||||| | ||||||||||| ||||| Sbjct 42627 CACCAACCCCTTCGATTTCATGGAGTCTATCTCCCTTGCTGGCAAGACCAACTTCTTTGA 42686 Query 102334 AAAG 102337 ||| Sbjct 42687 GAAG 42690 >seq127 Length=50345 Score = 87.8 bits (96), Expect = 4e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || || ||||||||||| || || || | ||| || || || || || ||||||||| Sbjct 26636 CCACCGGCAGTCTTGGAAATCATAGCACACGTCTTCAGTGTGTCGTAGATGCCCTCAATG 26695 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || || || | | | | | | |||||| || | || || || | || ||| | Sbjct 26696 CTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACCAGCA 26755 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || ||||| |||||||||||||| || || || | | |||||||| | || |||||| Sbjct 26756 TTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGTTTCA 26815 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 | | | | ||||| |||||||| || || || |||||||| | | || || Sbjct 26816 AGGGCCTTCTCAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGAGGTGTTGG 26875 Query 95032 GGGCGCTC 95039 || ||||| Sbjct 26876 GGACGCTC 26883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989531039629035